| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1173 |
|---|
| Symbol | |
|---|
| ID | 4462638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1257208 |
|---|
| End bp | 1258491 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700190 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_843595 |
|---|
| Protein GI | 116754477 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATGC TTGAGGATGC CGCAGCTGGA AGGCTGAATG ACGAGATGAG ACTAGTGGCA
CAGGCTGAGG GAAAGAGTCC TGAGTTCATA CGCAGAGGCA TTGCAAGCGG AAGAATAGTG
ATACCCATCT CTCCATACAG AGAGACCAGG CCGGTGGGTA TAGGAAAGGG CCTGCGCACC
AAGGTGAACG CATCCATAGG CACGAGCTCT GACATCGTGG ATGTGGATAT GGAGGTCGAG
AAGGCGCGTG TTGCGGAGAG CGCAGGGGCT GACACGCTGA TGGAGCTCTC AACAGGCGGT
GACCTGCGCG AGATCCGGAG GAGGGTGATA GAGGTGACGA GCCTCAGCGT CGGCAGCGTT
CCGCTCTATC AGGCATTCAT CGAGGCGATA AGGAAGCACG GCGCAGGCGT TGATATGACA
GAGGACGAGC TGTTCCGGGC TGTGGATGAG CAGGCGCGGA TGGGCACCAA CTTCATGGCG
ATACATACAG GAATAAACAG AATCTGCCTG GAGCGCCTGA AGGCGCAGGG CGGCAGGTTC
GGAGGGCTCT GCAGCCGTGG GGGCGCGTTC ATGATAGCCT GGATGCTTCA TAACGAAAAG
GAGAACCCTC TGTATAGCGA ATTCGACTAC CTTCTTGAGA TACTGAAGGA GCATGAGGTG
ACTCTTAGCC TCGGGAACGG CATGCGTGCG GGCGCGATTC ACGACTCGAC GGATAGAGCT
CAGATACAGG AGCTTGTAAT CAATGCGGAG CTCGCGGACA GAGCGCAGGC GGCAGGCGTC
CAGACGATCG TCGAGGGGCC GGGGCACATA CCTGTTGATG AGATAGAGGC GAACATAAGG
ATCATGAAGC GCATGACCGA TGAGCGGCCG TTTTACATGC TGGGTCCTCT GGTGACAGAT
ATAGCTCCCG GCTACGATCA TATCGTGGCT GCTATTGGGG CGAGCCTGTC CAGCGCATAC
GGTGCAGACT TCATCTGCTA CGTCACACCT GCGGAGCACC TTGCGCTCCC CACTCCGGAG
GATGTCAGGG AGGGTGTAAT CGCTGCAAGA ATCGCTGCTT ATATCGGGGA TATGATCAAG
CTCGGCAGAA GAGACAGGGA TCTGGAGATG GGGAGGGCAA GAAGAGATCT GCTCTGGGAT
ATGCAGTTTC ACCTGGCACT GGACCCGCAG AGGGCCAGGC AGATCAGGGC TGAGAGAGAG
CCTGCTGATA GCAGGGTCTG CACGATGTGC GGCGATTACT GCGCTCTGAA GATAATAAAG
AGCAGCATCA ACCTGAGCAA GTAG
|
|---|
| Protein sequence | MGMLEDAAAG RLNDEMRLVA QAEGKSPEFI RRGIASGRIV IPISPYRETR PVGIGKGLRT
KVNASIGTSS DIVDVDMEVE KARVAESAGA DTLMELSTGG DLREIRRRVI EVTSLSVGSV
PLYQAFIEAI RKHGAGVDMT EDELFRAVDE QARMGTNFMA IHTGINRICL ERLKAQGGRF
GGLCSRGGAF MIAWMLHNEK ENPLYSEFDY LLEILKEHEV TLSLGNGMRA GAIHDSTDRA
QIQELVINAE LADRAQAAGV QTIVEGPGHI PVDEIEANIR IMKRMTDERP FYMLGPLVTD
IAPGYDHIVA AIGASLSSAY GADFICYVTP AEHLALPTPE DVREGVIAAR IAAYIGDMIK
LGRRDRDLEM GRARRDLLWD MQFHLALDPQ RARQIRAERE PADSRVCTMC GDYCALKIIK
SSINLSK
|
|---|
| |