Gene Mthe_1160 details

Gene Information

• Locus tag: Mthe_1160
• ID: 4462963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: -
• Start bp: 1241782
• End bp: 1242447
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639700177
• Product: chromosome segregation and condensation protein ScpA
• Protein accession: YP_843582
• Protein GI: 116754464
• COG category: [S] Function unknown
• COG ID: [COG1354] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAGC TGAAACCTGA TCCATACGCA GGTCTTGAGA TGAGCGACCC GGCTGAGGTG 
CTGGTTGAGC TCGCCAGGCG GGGGGAGCTC GACCCCTGGG ATGTGGATAT AGTTAGAACC 
ACCGAGAGGT TCCTGGAGTA CGTCGAGTCG CTGGAGCGAA GGGATCTGCG GATACCTGCC 
AGGACTCTTC TGTACGCCGC GATCCTCCTC AGAATGAAGT CAGATGCAAT GGAGGAGCAG 
GAGGAAGAGG AGGAGATCGA GGAGGCACCT GTCGAGACAC ATGAGGATGT GGCGTACACC 
CTGCCTCAGC CGCCAGTCCG CCGCCGGACC AGACGACCTG TCACGCTTGA CGAGCTGATA 
GCTGAGCTCA AAAAGGCCGA GATGATTGGG AGAAAGAGAG CGATACGCCA GCGCCTTGCG 
GAGCCAGAGG AGGAGATACT GGACCTCTCC CATGAGGAGA ACGTCGAGGA GAGGATAAAG 
ATGCTCTCTC CTGTGATAGA GGATATGCTG AGCATGAAAG AGATGGTCGA GATCAAGGAG 
ATCGAGGGCG ACCGGATAAT GAACTACCTC GCGCTCCTCT TCATGGCTCA GAGGAAGCAG 
ATATGGCTCG AGCAGGAGCA GTTCTTTGGG GATCTCTTCA TCACCCGCCC CGGAGGGGGA 
ATGTGA 

 

Protein sequence

MSELKPDPYA GLEMSDPAEV LVELARRGEL DPWDVDIVRT TERFLEYVES LERRDLRIPA 
RTLLYAAILL RMKSDAMEEQ EEEEEIEEAP VETHEDVAYT LPQPPVRRRT RRPVTLDELI 
AELKKAEMIG RKRAIRQRLA EPEEEILDLS HEENVEERIK MLSPVIEDML SMKEMVEIKE 
IEGDRIMNYL ALLFMAQRKQ IWLEQEQFFG DLFITRPGGG M