| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1010 |
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| Symbol | |
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| ID | 4463209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1096830 |
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| End bp | 1097756 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639700029 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_843435 |
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| Protein GI | 116754317 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.926579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAC CATACATAGA TAATGGCTTT CTGCTCTCTG TGATCAAATT AGCAGCAGGT
CTGACGCTAA CGTTTATCGT GGCACACTAT TTAAACAAAT TTTTAATCAG CAAATTGGTT
TTACCACATC CCGAGCTGAT GACCACTCTG AGCATCCTCA GAAGAGTCGT TGTTCTATCT
GTGGCTCTGA TCGGTGCAAT GGCGACAGTA ACTACAGTAT TTCCACAGGC CATTGGCATG
ATAACTTCGC TATTTGTGGC TGCTGGATTT GCATCAATAG TCGTGGGCCT GGCAGCCCAG
TCGAGCCTGT CTAACGTGGT GGCCGGTATC TTGATATCAA TATCTCAGCC ATTCCGGATC
GGCGATGCTG TGATGTTCCG CGACGAGTAC TGCTATGTGG AGGATATGAG ACTTGTGCAT
ACGGTCCTGA GGACTTGGGA TAACCGGAGG CTAGTGATCC CTAATTCAGT CCTCCAGAGC
GAGGTTCTGA CCAACTACAG CATAGTTGAT CCATCAGTCC TCGTTCCGGT GTATGTGCAG
GTGAGCTACG ACTCAGATCT CAAAAAAGCA ATGGATATAA TGGTGGACGT GGCGAGGAGA
CATCCAGACT GCCTCCCAAC CGGCTCACTC CCGAATGCAG TAGTCATGGC GTTCGAGGAC
TCGGGCATCA GCCTCAGATT GCTAACCAGG GCAAAAGATC AGTCCACAGC ATTCGATATG
ACACGAGACC TGCTTTTCGA GATTAAAAAG GAGTTCGACA GGAACGGAAT AGTTATACCA
TACCCTGTGA GATATCTCAC ATTCGGACCT GAGGTTCGAG AGATTATATC GGATTTGAGA
AGAGCTGCTG AAAACGGAAT GGATGATTCG GAGAACCGAG CTGCAAAAGG TTCTGCCAGC
AATCCTTTTC CGCAATCCGA TTTATAG
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| Protein sequence | MQIPYIDNGF LLSVIKLAAG LTLTFIVAHY LNKFLISKLV LPHPELMTTL SILRRVVVLS
VALIGAMATV TTVFPQAIGM ITSLFVAAGF ASIVVGLAAQ SSLSNVVAGI LISISQPFRI
GDAVMFRDEY CYVEDMRLVH TVLRTWDNRR LVIPNSVLQS EVLTNYSIVD PSVLVPVYVQ
VSYDSDLKKA MDIMVDVARR HPDCLPTGSL PNAVVMAFED SGISLRLLTR AKDQSTAFDM
TRDLLFEIKK EFDRNGIVIP YPVRYLTFGP EVREIISDLR RAAENGMDDS ENRAAKGSAS
NPFPQSDL
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