| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0992 |
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| Symbol | |
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| ID | 4462868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1077130 |
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| End bp | 1078488 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639700011 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_843417 |
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| Protein GI | 116754299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCTG AAAATCCAAC CGATAACTGC ATCGCATCCG ATCTCATCTC GACTGCCGTG
AGAATCCTCC GGCTCGGCCC GATATGCGAC AGCTGTTTTG GCAGGCAGTT CGCCATGCTT
GGGACAGGCA TGACAAACAG CGAGCGCGGG CGATCGATAA AAACGCTCAT GGTCATGAGT
GCAGATCTCC AAGCTTCTGA TGAGTCCAGG GAGATGCTGC GCGCACTCGC ACCGTCCTGC
AGGCAGGCCA GGCTCAGGCT GGGGGTCGAG GGCGACGATG AGAACTGCTG GGTGTGTCTT
GGTCAGATGT ATCCGGAGCG CCTGGAGGAG CTCGCAGACA GGGCTGTGGA TGAGCTTAAA
GGAATAGAGT GCAGCAGGTT TCTGGTCGGC ACATTCATGA GCGGTCTTCT TGCTGAGAAT
GAGGAGCTCC TGCTCGCGGA TGGTTGCTCC AGGCATGCAG AGCCCATGAA GTCAGAGATC
AACCGCGAAG TGGGGAAGCT CATAGCATTG AAGAGCGGGA AGCAACCAGA TCTCAACAAT
CCTGAGGTTG TTGTGCATCT TCATCTCTCA GACGGGCACG TCGAAATACA GATCCAGCCG
CTTTACATCT ACGGGAGGTA CAGGAAGCTT CAGCGCGGAT TTCCGCAGAC GAGATGGCCG
TGTAGGGTCT GTGGCGGAAG GGGCTGCGAG AGATGCGGCA ACACAGGGCG AATGTACCAG
GAGTCTGTGG ATGAGCTCAT AAGGGGCCCG ATCGTGGAGG CGGCGGACGC TGAGGACACG
GTTTTCCATG GCGCTGGGAG AGAGGACATA GATGCCAGGA TGCTTGGCAG CGGCCGGCCC
TTTGTGGTCG AGGTCGTGCG TCCACGCAGA AGAGATCTTG ATCTGAACGC GCTGAGGGAC
GAGATAAACA GACGTTGCAG TGGCAAGGTA GAGGTCAGCG ATCTCATTTT CGTTGACAAA
TCCATGGTCG AGATGGTGAA GAATGAGAGG TTCGAGAAGA CCTACGAGGC TCTAATCGAG
TTCTCCGTAC CAGTGGAGGA AGAAAAGCTT AAATCCGCCC TGTCCAGATT GATAGGTTTT
GTAGAACAGC GTACGCCAAC TCGCGTCTCT CACAGAAGGG CGGATAAGGT CCGCAGGAGG
GCGGTGCATA GCGCCGAGCT GGAGGAGTTC AGCGGCAGAA CGGCAAGGAT AACCGTCCGC
TGCGATAGCG GGCTCTACGT TAAAGAGCTG ATATCAGGGG ATGCTGGCAG GACCAGGCCC
AGCCTTGCGG AGCTTCTAGA ATCAGACGCC AGGGTCGTGG AGCTGGATGT AATAGATGTA
GGTGGAGTGC CTAATGCCAA AATCACACGG ATTTCGTAA
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| Protein sequence | MPSENPTDNC IASDLISTAV RILRLGPICD SCFGRQFAML GTGMTNSERG RSIKTLMVMS
ADLQASDESR EMLRALAPSC RQARLRLGVE GDDENCWVCL GQMYPERLEE LADRAVDELK
GIECSRFLVG TFMSGLLAEN EELLLADGCS RHAEPMKSEI NREVGKLIAL KSGKQPDLNN
PEVVVHLHLS DGHVEIQIQP LYIYGRYRKL QRGFPQTRWP CRVCGGRGCE RCGNTGRMYQ
ESVDELIRGP IVEAADAEDT VFHGAGREDI DARMLGSGRP FVVEVVRPRR RDLDLNALRD
EINRRCSGKV EVSDLIFVDK SMVEMVKNER FEKTYEALIE FSVPVEEEKL KSALSRLIGF
VEQRTPTRVS HRRADKVRRR AVHSAELEEF SGRTARITVR CDSGLYVKEL ISGDAGRTRP
SLAELLESDA RVVELDVIDV GGVPNAKITR IS
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