Gene Mthe_0849 details

Gene Information

• Locus tag: Mthe_0849
• ID: 4463062
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 915620
• End bp: 916312
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639699869
• Product: phage shock protein A, PspA
• Protein accession: YP_843278
• Protein GI: 116754160
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.813503
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCCTTT TAGATCGCAT GGGAACGATA GTCAGATCGA AGATGAGCAG GATAATGGAC 
AAGATGGAGG ATCCGAGAGA AGTGCTGGAT TACTCCTATG AAAAGCAGCT CGAGCTGCTC 
CAGAATGTCA AGAGGGGCAT TGCAGAGGTC GCCACCTCTA AGAAACGCCT GGAGCTCCAG 
CGCGCCAGGC TTGCACAGAA CGCGGAGCAG CTCGAAGGGA AGGCGCGCGA AGCCCTGAAC 
TCCGGAAGGG AGGATCTCGC AAGGCAGGCG CTCGAGAGAA AGGTATCCCT GCAGAACCAG 
ATCGAGACCC TGGATGCGCA GATCGCCGAG CTCGATCGCG AGGAGCAGAA GCTCATCGCT 
GTGGAGACAC GCCTCTCAAC GAAGATAGAG ACGCTTCGCG CCAGGAAGGA GGCGATAAAG 
GCGCAGTATT CAGCGGCTGA GGCGCAGGTC AAGGTGAGCG AATCTGTGAC AGGCATAAGC 
GAGGAACTCG CGGACGTCGG TCTTGCGATA CAGCGCGCCG AGGAGAAGAC TGAAGGGATG 
AAGGCCCGCG CTGCAGCTCT CGATGATCTC CTCGAAAAGG GGGTTCTCGA GGACTACACC 
GGAGGAGATG CTCTGGATAG AGAACTCTCG AAGGCGAAAA CATCAAGCGC CGTAGATGCG 
GAGCTGGCCA GGCTCAGGGG TGAGACGAAA TGA 

 

Protein sequence

MGLLDRMGTI VRSKMSRIMD KMEDPREVLD YSYEKQLELL QNVKRGIAEV ATSKKRLELQ 
RARLAQNAEQ LEGKAREALN SGREDLARQA LERKVSLQNQ IETLDAQIAE LDREEQKLIA 
VETRLSTKIE TLRARKEAIK AQYSAAEAQV KVSESVTGIS EELADVGLAI QRAEEKTEGM 
KARAAALDDL LEKGVLEDYT GGDALDRELS KAKTSSAVDA ELARLRGETK