| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0825 |
|---|
| Symbol | |
|---|
| ID | 4462968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 889627 |
|---|
| End bp | 890400 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699843 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_843254 |
|---|
| Protein GI | 116754136 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.742909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG TTGCCTTGAC TGGGGCAAAG GGCAGGATGG GGTCTCTGAT AATCGATGAG
ATCAGGAGTT CCCCTGATCT GAAGCTTGTG GCTGCGATCG ACATCATCGG TATAGGTGAC
CGGGTTCTTG GAGATGTATG CGTATCAGAT GCGAGGGATG TGCAGAGGGT TCTCAGAGAA
TCGCGCCCTG ATGTGCTGAT CGACTTCACA GTGCCATCTG CAGCACTGGA AAACATCCAT
GCAGCTGCTG ATACAGGAGT GGCTCTTGTT GTCGGCACGA CTGGGTTCTC TGAGGAACAG
CTCTCGATTA TAGAGGAGAT GATAAAAAGC GCGGGCATCG CTGCTGTGAT CTCACCCAAC
TTCAGCCTTG GAGTCAACGT CTTCTGGAAG CTCGTGGAGA TGGCTGCCAG ATCTCTTAGC
GATTATGATG TTGAGGTCAT AGAGGCACAC CACCGCAAAA AGAAGGACGC CCCCAGCGGG
ACCGCGATGA GAACTGTTGA GATACTCAGC CGCTCTCTCG GGATAGAGGA TGTCCGCCAC
GGCAGAGAGG GAATGTGTGA AAGAGGAAGA GAGATAGGGG TGCATGCGGT CAGAGCTGGC
GATATAGTTG GGGATCACAC CGTGCTCTTT GCCGGTCCTG GGGAGAGGAT AGAGATCAAG
CACCAGGCGC ATAGCAGGTC CGCCTTCGCC AGAGGCGCTC TGAGAGCTGC AAGGTGGGTT
GTCAAGGCCC CTCCGGGGAT CCACAGCATG GAAGAGGTGT TGGCTTCGAG TTGA
|
|---|
| Protein sequence | MTDVALTGAK GRMGSLIIDE IRSSPDLKLV AAIDIIGIGD RVLGDVCVSD ARDVQRVLRE
SRPDVLIDFT VPSAALENIH AAADTGVALV VGTTGFSEEQ LSIIEEMIKS AGIAAVISPN
FSLGVNVFWK LVEMAARSLS DYDVEVIEAH HRKKKDAPSG TAMRTVEILS RSLGIEDVRH
GREGMCERGR EIGVHAVRAG DIVGDHTVLF AGPGERIEIK HQAHSRSAFA RGALRAARWV
VKAPPGIHSM EEVLASS
|
|---|
| |