| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0820 |
|---|
| Symbol | |
|---|
| ID | 4462111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 884358 |
|---|
| End bp | 886550 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699837 |
|---|
| Product | elongation factor EF-2 |
|---|
| Protein accession | YP_843249 |
|---|
| Protein GI | 116754131 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR00490] translation elongation factor aEF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA GAAAGAAGAT CGCAGAGCGT GTGGTAGCTC TGATGGACAA GCCCGAGAGG
ATACGAAACA TCGGGATAGT CGCGCATATA GATCATGGCA AGACGACGCT ATCAGACAAC
CTTCTGGCAG GCGCAGGCAT GATCTCCATG GAGCTCGCTG GAAAACAGCT CTTCATGGAC
TTCGATCCAC TTGAGCAGGC CAGGGGCATA ACGATAGATG CCGCAAACGT CTCCATGGTC
CATGAGTATG AGGGGAAGGA GTATCTGATC AACATGATCG ATACTCCAGG GCACGTGGAT
TTCGGCGGCG ACGTCACACG AGCGATGCGC GCGGTTGATG GCGCAGTCGT TGTTGTTGAT
GCAGTGGAGG GCGCAATGCC GCAGACCGAG ACCGTTCTGA GGCAGGCGCT TCGCGAGGGC
GTTCGCCCAG TTCTGTTCGT GAACAAGGTT GACAGGATGA TCAATGAGCT CAAGGTTGAG
AAGAAGGAGA TGGCAATTCG TCTTGGAAGG GTCATCGACA ACATCAACAA GCTCATCAGA
AGCATGGACG AGGAGCACTA CAAGGCCGGA TGGAGGCTGG ACGCCGCAAA CGGCAGCGTG
GCATTTGGCT CGGCCCTCTA CAACTGGGCG ATAAGCGTTC CGCAAATGAA GAGGACAGGC
ATAGGCTTCG ATCAGGTCTA CGATTACTGC CGCTCGGATC GTATGAAGGA GCTGTCGCAG
AAGTGTCCTC TCTATGTTGC GGTCAACGAT ATGATAATCC GCTTCCTGCC GAGCCCGCTC
GAGGCACAGA AGAACAGAAT CAGGGTCATA TGGAAGGGCG ACTGGAACAG TCCTGTGGGG
AAGGCTATGA CTGCATGCGA TCCGAACGGG CCTGTAGCCT TCATGGTCAC GAAGATCAAG
GTGGATCCGC ATGCTGGTGA GGTTGCAACC GGACGACTCT TCTCAGGTAC GCTTGTTCGC
GGCATGGAGC TCCACATCTC AGGGGTTCCT CATACGAACA GGATCCAGCA GACTGGCATC
ATGATGGGTG CTGAGAGGAT AGAGGTGGAG AGGATTCCTG CAGGGAACAT CGCAGCTGTT
ACCGGTCTGA GAGACGCGAT CGTTGGCTCG ACAGTCTCGA GCGATCCGAA CATGACACCG
TTTGAGATTA TAAAGCATGT CTCAGAGCCT GTCATGACGG TTGCGGTCGA GGCGAAGAAC
ATGCGCGATC TCCCCAAGCT CATAGAGGTC CTCCGCCAGA CAGCAAAAGA GGATCCGACA
CTCCAGATAA CGATCAATGA GGAGACAGGC GAGCATCTCA TGGCCGGGAT GGGTGAACTC
CATCTCGAGA TAGTGGCCAC CAGGATCCAG AGGGACAAGG GCGTTGAGAT AAAGACATCT
CCTCCCATCG TGGTCTACAG GGAATCCGTA ACTGGCAAGT CCGGGCCAGT AGAGGGCAAG
TCTCCGAACC ACCACAACAG GTTCTACATA GAGATAGAGC CTCTGGAGCC CGGTGTGATC
GAGGTCCTGA AAGATGGGAA GATCGACATG AAGATGGAGG AGGTCGAGCG CAGGAAGATC
CTGATCGAGG CAGGCATGGA CAAGGAAGAG GCCAGGAACA TGGTCAACTT CGTCGGAACC
AATATGTTCT TGAACATGAC AAAGGGCATC CAGTACCTCA GGGAGACCAT GGAGCTCATA
CTCGAGGGCT TTGAGGAGGC GATAACTGCA GGGCCAATCT GCAGGGAGCC GGTGCAGGGG
ATAAAGGCGA AGCTTGTGGA CGTCAAGCTC CATGAGGATG CTGTCCACAG AGGACCCGCA
CAGGTGATAC CTGCGGTCAG GCAGGCGGTC CAGGCCGGAA TACTCATGGC CAACCCAACG
CTGCTGGAGC CGATGCAGTA CGTCTTTATA CAGGTACCCC AGGACCAGAT GGGCGGTGCA
ATGTCAGAGA TCCAGGGTCG CCGTGGTGTT ATCCTGAGCA TGGAGACAGA AGGGGATATG
ATCACGATCA AGGCCAAGAT GCCTGTCGCA GAGATGTTTG GCTTCGCAGG CGCGATCCGA
TCTGCAACAG AGGGCAGGGC GCTCTGGTCC ACCGAGTTCG CAGGATTCGA GCCGATCCCG
GCAAACATGA TGCTGGATAC GGTTCGGCAG ATCAGGACCA GGAAGGGATT GAAGCCTGAG
ATGCCAACAC CGAGCGACTA TCTCAAGGCG TGA
|
|---|
| Protein sequence | MGKRKKIAER VVALMDKPER IRNIGIVAHI DHGKTTLSDN LLAGAGMISM ELAGKQLFMD
FDPLEQARGI TIDAANVSMV HEYEGKEYLI NMIDTPGHVD FGGDVTRAMR AVDGAVVVVD
AVEGAMPQTE TVLRQALREG VRPVLFVNKV DRMINELKVE KKEMAIRLGR VIDNINKLIR
SMDEEHYKAG WRLDAANGSV AFGSALYNWA ISVPQMKRTG IGFDQVYDYC RSDRMKELSQ
KCPLYVAVND MIIRFLPSPL EAQKNRIRVI WKGDWNSPVG KAMTACDPNG PVAFMVTKIK
VDPHAGEVAT GRLFSGTLVR GMELHISGVP HTNRIQQTGI MMGAERIEVE RIPAGNIAAV
TGLRDAIVGS TVSSDPNMTP FEIIKHVSEP VMTVAVEAKN MRDLPKLIEV LRQTAKEDPT
LQITINEETG EHLMAGMGEL HLEIVATRIQ RDKGVEIKTS PPIVVYRESV TGKSGPVEGK
SPNHHNRFYI EIEPLEPGVI EVLKDGKIDM KMEEVERRKI LIEAGMDKEE ARNMVNFVGT
NMFLNMTKGI QYLRETMELI LEGFEEAITA GPICREPVQG IKAKLVDVKL HEDAVHRGPA
QVIPAVRQAV QAGILMANPT LLEPMQYVFI QVPQDQMGGA MSEIQGRRGV ILSMETEGDM
ITIKAKMPVA EMFGFAGAIR SATEGRALWS TEFAGFEPIP ANMMLDTVRQ IRTRKGLKPE
MPTPSDYLKA
|
|---|
| |