Gene Mthe_0672 details

Gene Information

• Locus tag: Mthe_0672
• ID: 4463312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: -
• Start bp: 708154
• End bp: 710055
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639699682
• Product: Na+/solute symporter
• Protein accession: YP_843102
• Protein GI: 116753984
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG0591] Na+/proline symporter

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATCCAT ATCACATATT CCTCCTCATC CTGGGCGTAT ATATTTCTGT GCTCGTCGGC 
ATAGGCTTCA TCTCATCGAA GCGGCAGGGA TCTGTGACTG AGTTCTGGCT GGCAAGCCGG 
GAGCTGGGGG CAGCCTCCTT GGGATTCTCG GCTGCGGCTT CATGGCTCAC GGCCAGCGCT 
TTGCTGCTTT CCACAGGTCT TTTCATGCTC ATAGGCGTCA GCTCGATATG GGTGTGGGTA 
TTTCCGAACA TAGCTGCGCT GGCGATCATA GCGCTGATCG CAGGCAGGAT CAAGCGCATA 
CCTGCGATGA CCCAGCCTGA GCTTCTGGAG ATAAGATACG ATCCAATGGT CAGAGCTCCG 
GTCGCGGTGG CGATAACGAT AATGATGATT CTCTTCTCAG TGGTTGATTT CATCGGGTTC 
AAGCTCGTTC TGGGGACTTT CTTCGGGGTC GAGCCACTGT ACGCGGTTCT GATCATGGCG 
GTGTCCGTGG CGCTCTACGT CAGCCTCGGT GGGTTCAGAG CGGTTGTCTG GACCGACAGG 
GTCCAGTACA TCTTCCTGGC AGGGCTCGCG GTTGTTGTGG CGATTCTCTC CCTGAAGCTC 
TCGGCAGATC GGGGCGCATC CATCATCGCG GAGAGCGCTG CCCTCGGCGG GGAGTGGTGG 
AACCCGTTCA TGATGGGGGG CGTGCTCGGC GCCCTTGTCT TCCAGCTCGC CCTGCTCCCC 
GGCTGGATCG CGGAGCAGGA CCCGTGGCAG AGGGTCTGGG CCGCGCGCGA TGAGAGAAGC 
GCGAGGATGG GCTTGCTCCT GGGGTCGATG CTTCTCGCGA TCGTTTACGG CGCATGCTTC 
CTCACGGCGA TAGCCCTGCG CGCGATCTAC CCGCTCCCTG AGGGCGAGGT GGAGGCTGAG 
ATGCTGTACC TCAGGTTCAT CTCCGAGAAC GTGCCACCTG CAGCAGTCGC GCTGCTCACA 
ATAGGATTCG CTGCCGCGTC CATGTCGTGC ACAGACACCT TTGCGACATC TGGCGCGTCC 
TGCATCGTCA GGGACATCTT CCAGAGGTTC GTCAAACCGG ATGCCACCAT GCGGGAGATG 
CTGATAATCA GCAGGGTGCT TGTGGTCATG ATGATCTCCA TCTCAGCGTT CATCGCGCTG 
AATGTGGAGA GCATCATGGA GGCTGTGATA ATAGCCACCG TTATAGGGAC AACATCCTAC 
TTCTTCCCGA TCGTCGGCGG GCTTTACTGG AAGAGGGCCA CATCCTGGGG CGCGCTTGCA 
GCTGTCATCG TCGGTGGCGT GACACAGATC GTGATGATCG CGTATGAGAA GTTCATTTTT 
GGGGAGCCAC TCGACACGAT CTCTCCACTC CTCACAGAGC ACGGCGTGCT CGTCGGCCTG 
ACTCTGAGCG CATCGGTATT CGCGATCGTC TCCCTTCTCA CGCCGCCCAC CGACGACAGG 
AGGCTCGCGC CATTCTTCTC AGATATCGCA GAGAGGCTCT TTGGTGGAGC CATGATCACA 
GTTGACAGGA AGAACTCCAG GTATCCTATC ATCATGAGAA TGATAGAGGA GAGGGGTTTC 
GGAGAGAGAA CGCATCTCGA TCTGGCGCTG AGGGTGAACC CGCTGAAGGC GGATGGAGCT 
CAGATCAGGG GAGAGATAAG CTGGGATAGA CTCATCGAGG ATCTGAGATC CAGGCATCCG 
GAGTGGTACA CGCCGACCGG GAGCCATATC GCGTACAGGC TCTCACAGCA TGACATGCTT 
GCGTGCGTGA AGCTCTACAG GGGGGATGAG ATGGAGATCA GACTCTCTGC TGAACCAAGG 
CTCTCCCAGA GGGAGAGGTT CAGGGACGAG ATGTATCTCG CGGTAGAGGA GATAGAGGAG 
TCGCTTCTGA GCATGGGATA CACGACATCA CTGCCCGCAT GA 

 

Protein sequence

MDPYHIFLLI LGVYISVLVG IGFISSKRQG SVTEFWLASR ELGAASLGFS AAASWLTASA 
LLLSTGLFML IGVSSIWVWV FPNIAALAII ALIAGRIKRI PAMTQPELLE IRYDPMVRAP 
VAVAITIMMI LFSVVDFIGF KLVLGTFFGV EPLYAVLIMA VSVALYVSLG GFRAVVWTDR 
VQYIFLAGLA VVVAILSLKL SADRGASIIA ESAALGGEWW NPFMMGGVLG ALVFQLALLP 
GWIAEQDPWQ RVWAARDERS ARMGLLLGSM LLAIVYGACF LTAIALRAIY PLPEGEVEAE 
MLYLRFISEN VPPAAVALLT IGFAAASMSC TDTFATSGAS CIVRDIFQRF VKPDATMREM 
LIISRVLVVM MISISAFIAL NVESIMEAVI IATVIGTTSY FFPIVGGLYW KRATSWGALA 
AVIVGGVTQI VMIAYEKFIF GEPLDTISPL LTEHGVLVGL TLSASVFAIV SLLTPPTDDR 
RLAPFFSDIA ERLFGGAMIT VDRKNSRYPI IMRMIEERGF GERTHLDLAL RVNPLKADGA 
QIRGEISWDR LIEDLRSRHP EWYTPTGSHI AYRLSQHDML ACVKLYRGDE MEIRLSAEPR 
LSQRERFRDE MYLAVEEIEE SLLSMGYTTS LPA