| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0645 |
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| Symbol | |
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| ID | 4462285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 679481 |
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| End bp | 680506 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639699653 |
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| Product | CRISPR-associated RAMP Cmr6 family protein |
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| Protein accession | YP_843075 |
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| Protein GI | 116753957 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.12027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTGC CTCTTTACAG AACCATCTCT GAGCCCAAGT GTGTAGAAGG AAACGCAGGG
CTCTGGTACG ACAAGTTCTG CGACATGTGG AACGATGATT TCAACAGCCT GGGGGATAAC
GGCAAGAAGG AGTGGATCAG GACTGTTGTG AGGAATGTGG GAGATGAGGC TCTCCTCAGG
GAGATCAAGG AGCGTGTGAT CTCCCTGATC TCAAATTCGG GCGGAAAGGC CATGCTCTTC
AGGACCACCG CGCCGTTCGT CACAGGCCTC GGGAGGAGCC ATCCTGTGGA GAACGGCTTC
GCGTGGCACC ACACGCTCGG CATCCCGTAC CTTCCTGGCT CATCTGTTAA GGGAATTGTG
AGGGGCTGGG CGCGGCTGTG GAGGAATCTG GACAACGGGG AGATCCGCAG GATCTTCGGA
CCGGATGGCG CAGGCAGTGT GGGATCCGTT ATCTTCCTGG ACGCCCTGCC GGTCAGACCT
GTGGAGCTGA AGGCGGAGAT AATGACGCCT CACTACGGGC CGTACTACAG AGGTGATAAA
CCTCCAGAGG GCTGGCCTGC TGACTGGCAC AGCCCTGTGC CGATACCGTT CCTCGCTGTC
GCTGAGGGCC AGGAGTTCCT CTTTGGGGTG ATTCCGAGAA AAGAAGCCAC TCAGGACTGC
GAGAAGGTGA TCGGATGGCT CAAAGAGGCG CTGCAGGAGA TCGGCGCGGG CGCAAAGACC
GCAGTCGGAT ACGGCAGGTT CGCCTGCATC GAAGCAGAGA CCCCAGAGGA AGCGGCGCCA
GAGCCCATGA CACCGGGGCG CGAGTGGCTG GAGAAGCTCG CCGAAGAAAT GGGAAAGAGC
GTGGAGGATT TCGCTAAAGA GTGCCCAAAA GTGCTCGCTG ACAGGTGGAA TGCGATCGAG
AATGATGAGC TCAAAGGGAT GGTCCGGCAG GAGATCATGC AGATATACCA ATGCATGAAT
CTCTGGGAAG ACGCGCCCTC AAAGAGCATG CGAAAGACTC TGGATCGTTA CAAGGCCTGG
AGATGA
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| Protein sequence | MPLPLYRTIS EPKCVEGNAG LWYDKFCDMW NDDFNSLGDN GKKEWIRTVV RNVGDEALLR
EIKERVISLI SNSGGKAMLF RTTAPFVTGL GRSHPVENGF AWHHTLGIPY LPGSSVKGIV
RGWARLWRNL DNGEIRRIFG PDGAGSVGSV IFLDALPVRP VELKAEIMTP HYGPYYRGDK
PPEGWPADWH SPVPIPFLAV AEGQEFLFGV IPRKEATQDC EKVIGWLKEA LQEIGAGAKT
AVGYGRFACI EAETPEEAAP EPMTPGREWL EKLAEEMGKS VEDFAKECPK VLADRWNAIE
NDELKGMVRQ EIMQIYQCMN LWEDAPSKSM RKTLDRYKAW R
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