| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0548 |
|---|
| Symbol | |
|---|
| ID | 4463008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 569493 |
|---|
| End bp | 570359 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639699554 |
|---|
| Product | protein of unknown function RIO1 |
|---|
| Protein accession | YP_842979 |
|---|
| Protein GI | 116753861 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0501425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATACAGC TGGCAGAGCG GTTTCTGAGC CTCAGATCTG AGGATGTGAC CCTACTTAGA
GCCATCGAGG CCGGAATGCG CCGGCGGGAA TGGGTGCCCA TCGAGGAGAT CTCAGCCATC
TCCGGCATAC CGGCCTCGAA GGCAGATTAT TACCTCAGGC TGCTCTCAGA CAGAAAGCTC
GTCGCACACA CGAATGTTCC ATACGAGGGT TACCAGATCG AGTTTGCAGC ATACGATCTT
CTCGCGCTTC ACGATCTCGT CAGGAGAGGC TTCGTGGCGT CACTCGGCGA CAGGCTGGGC
GTTGGCAAGG AGTCTGTCGT CTACGAGGCC CTCGATGATA TTCCGCTGGT TATAAAATTC
CACCGGGAGG GGAGGACCAG CTTCTCCAGG GTGAGAAGGG TCAGGGACTA TCTCAGGGAC
AGGCCTAAGG TTGCATGGAT CTATGCTGCA GCTCTTGCGG CCAGAACTGA GTTTGATGTG
ATGAGGAAGC TCTACCCACA TGTCTCCGTT CCTAAGCCTA TCGCTCGGAG CAGGCATGCG
GTTGTGATGG AGAGGGTTCC AGGGGTGCTT CTCACGAAGA CCGATCTCGA TGATCCCGCA
TTCTATCTCA ACAGAATCCT GGAGGAGATC GGCAAGGCAT ACAGGCTCGG AGTGATACAC
GCAGACATGA GTGAGTACAA CGTAATTGTG GCGGATGACA TAATCATAAT CGACTGGCCC
CAGGCGGTCG GGAGTGACCA TGAGAGCGCG GAGGAGCTTC TCAACAGGGA CATCTCCAAC
ATACTGAAAT ACTTTAAGCG CAGATATAAA ATAGATCTGG AACCAGAAGA GGTCATCCGA
AAGATAAAGG TTGATGATGG AGAATAG
|
|---|
| Protein sequence | MIQLAERFLS LRSEDVTLLR AIEAGMRRRE WVPIEEISAI SGIPASKADY YLRLLSDRKL
VAHTNVPYEG YQIEFAAYDL LALHDLVRRG FVASLGDRLG VGKESVVYEA LDDIPLVIKF
HREGRTSFSR VRRVRDYLRD RPKVAWIYAA ALAARTEFDV MRKLYPHVSV PKPIARSRHA
VVMERVPGVL LTKTDLDDPA FYLNRILEEI GKAYRLGVIH ADMSEYNVIV ADDIIIIDWP
QAVGSDHESA EELLNRDISN ILKYFKRRYK IDLEPEEVIR KIKVDDGE
|
|---|
| |