Gene Mthe_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0528 
Symbol 
ID4462720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp544755 
End bp545840 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content48% 
IMG OID639699533 
Productperiplasmic binding protein 
Protein accessionYP_842959 
Protein GI116753841 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.147263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACT TAATCATAAT CTTAACCTTA ATATTGTCCA TCGTCCTGTG TGCTGCAGAG 
AACTCCTCAG AGTATCCGAT AACGATCACA GATTCGATGG GTAGAAATGT AACCATAGAT
GTCCCTATTG AGAGGATTGT TGTTCTGAAC TCAGATGCAG CCGAGGCTGT GGCGATACTC
GGGTGTGCAG ATGAGATCGT CGGAGTCTCT GACACAGTCA AGAACAAGGA ATACTATTTC
CCACAGCTAA AGGGAGCGCA GCTTGTGGGA ACGTGGAAGG AGCCGGACTA CGAAATGATA
GCGGAGATCG CAAAGGTGGG TGATGAAGTT GTCCCCAATA TCCTTGTAAT AACATATACA
TCCCCCGGGA AGTTATATGG GGTGGAAGAA GCTGCTGCAA AGCTCGAGCC CTTTGGCATC
AAAGTCGTTG GTCTCGACCT GAACAAGCCT GAAACAATGA TATCAGAGAT TCTAACGCTT
GGCAAGATCC TGGACAGAGA AGAGGAGGCC AGCAGGTACG TGGAGTGGTA CAAGAGCGTA
CAGGAAGAGG TGGAGGATGC TGTAAAGGAT GAGAGCGTTC CGAAAGTGTA CGTCGAATCC
ACATCAAAAG GTGGGTCTTA CACCACACAC GGTCCCGGCT CTGGCGTTGA CCAGCTCGTA
TCAATTGCGC GCGGGCATAA CATCGCAGCC GATCTCAGAG AAGCTTATCC GGTCGTCGAC
TGGGAATGGG TTATCTCCAA GAATCCGGAT ATCATAATAA AAAAGGTCTC GTACACCGAT
AGAACACCAT ATCCATTCGG ATGGGAGATA CCACCATCAC AAGACAGCGT GAAACTTGAG
AATATATTAA ATGAGATCAT CAGCAGACCC GGGTCAGAGA GCATCAGCGC CATCAAAAAC
AGCAGGGTTT ATCTGATGAA CTGGGAGATA ACTGCAGGCC TTGATGATGT GGTGGGTCTT
GCATACATGG CAAAGATCCT CCATCCTGAG ATCGATCTGG ATCCTGAGAA TGTTTACAGA
GAGTATCTCC AGATGCTCGG AGTCGATTAC CCCAAGAACC GGACATTTGT TTATCCGGAG
ATATGA
 
Protein sequence
MRNLIIILTL ILSIVLCAAE NSSEYPITIT DSMGRNVTID VPIERIVVLN SDAAEAVAIL 
GCADEIVGVS DTVKNKEYYF PQLKGAQLVG TWKEPDYEMI AEIAKVGDEV VPNILVITYT
SPGKLYGVEE AAAKLEPFGI KVVGLDLNKP ETMISEILTL GKILDREEEA SRYVEWYKSV
QEEVEDAVKD ESVPKVYVES TSKGGSYTTH GPGSGVDQLV SIARGHNIAA DLREAYPVVD
WEWVISKNPD IIIKKVSYTD RTPYPFGWEI PPSQDSVKLE NILNEIISRP GSESISAIKN
SRVYLMNWEI TAGLDDVVGL AYMAKILHPE IDLDPENVYR EYLQMLGVDY PKNRTFVYPE
I