Gene Mthe_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0359 
Symbol 
ID4462482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp354917 
End bp356158 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content55% 
IMG OID639699363 
Productpeptide chain release factor 1 
Protein accessionYP_842792 
Protein GI116753674 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1503] Peptide chain release factor 1 (eRF1) 
TIGRFAM ID[TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCT CTGCACAGGA AAAGTACGAG TTCAAGCGTC TGCTGGATGA GCTCAGATCA 
AAATCAGGAA GGGGCACGGA GCTCATCTCC CTATACATAC CGCCGGACAA ACAGATCTCT
GATGTGATGG CACAGCTCAG AGAGGAGCAC GGCCAGGCTG CCAACATAAA GTCCAAGCTC
ACGAGGACCA ATGTTCAGAG CGCGCTGGAG TCAGCAATGG CCAGGCTCAG GTTAATCCCG
AGAGCACCTG AGAACGGGGT TGTTCTCTTC ATCGGCGCTG TGGACATCGG CGGCAACAGG
ACTGACATGT ACACAAAGGT CATAGAGCCG CCGGAGCCGA TCACCACATA CCGGTACCAC
TGCGATTCGT CGTTTCTCCT GACACCGCTC GAGGAAATGC TCTCGGAGAA GAAGACATTT
GGTCTGATAG TTCTTGACAG GAGAGAGGCG ACCATAGGCA TACTCAAGGG CAAGAGGATT
GAACCTTTAA AGCATCTAAC ATCCACAGTT CCTGGTAAGC AGAGGAAGGG AGGGCAGTCT
TCTCACAGGT TCCAGCAGCT GAGGCTAATA GCGATCCACG ACTTCTACAA GAGGATCGGG
GAGGCAGCAA ACGATGCGTT TCTGAGCATA GATCAGAAGG AGCTCCAGGG CATCCTCATA
GGCGGGCCAT CCCCAACAAA GGAGGAGTTC ATAGCCGGAA ACTTCCTGCA TCACGAGCTT
CAGAGGAAGA TTGTGGATGC ATTCGATGTA TCATATACAG ATGAGGCAGG ACTCTCGGAG
CTCGTCGAGG CTGCGCAGGA CAGGCTTCTC GATCTGGAAC TCACCCAGGA GAAGCTGGCC
ATGCGCCGGT TCATGAAGGA ACTCGTGAGC GACAGAGGTC TCGCATCTTA TGGAGAGAAG
GAGGTGCGCC ACAACCTCGC CCTCGGCGCG GTTGATCTCC TTCTCCTCTC TGAGGAGCTC
AGGAAGACGA GAGCAAAGGT CAGATGCCAG AACCAGAGCT GTGATTATTC AGAGGAGATG
ACGAGAACAC CATCCTCCCC TGCGATAGGG ACGTGCCCCA AATGCGGCTC GCCCCTCACG
ATAACTGAGG AGGTGGATCT GATAACAGAA CTCTCCCAGC TGGCAGAGCA GAGCGGAGCA
GCCGTGAAGA TCATATCCAC AGACTTCGAG GAGGGTGCGC AGCTCCTGCA TGCATTCGGC
GGGATCGCAG CTGTACTGAG GTACAAAACA TCGCATCGCT GA
 
Protein sequence
MEISAQEKYE FKRLLDELRS KSGRGTELIS LYIPPDKQIS DVMAQLREEH GQAANIKSKL 
TRTNVQSALE SAMARLRLIP RAPENGVVLF IGAVDIGGNR TDMYTKVIEP PEPITTYRYH
CDSSFLLTPL EEMLSEKKTF GLIVLDRREA TIGILKGKRI EPLKHLTSTV PGKQRKGGQS
SHRFQQLRLI AIHDFYKRIG EAANDAFLSI DQKELQGILI GGPSPTKEEF IAGNFLHHEL
QRKIVDAFDV SYTDEAGLSE LVEAAQDRLL DLELTQEKLA MRRFMKELVS DRGLASYGEK
EVRHNLALGA VDLLLLSEEL RKTRAKVRCQ NQSCDYSEEM TRTPSSPAIG TCPKCGSPLT
ITEEVDLITE LSQLAEQSGA AVKIISTDFE EGAQLLHAFG GIAAVLRYKT SHR