| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0309 |
|---|
| Symbol | |
|---|
| ID | 4463287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 308539 |
|---|
| End bp | 310071 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639699314 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_842744 |
|---|
| Protein GI | 116753626 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCA ATATGGCAAT CATTCTCGGC CTGTATCTGG TGGGTCTTCT CGCCATAGGA
GCATGGGCAT CCAAGAAGGT CAAATCCTCT GAGGACTTCA TAGTTGCGGG AAGGAACCTC
GGCTTCTGGT TGCTCACACT GATGATAGTG GCAAGCATAT GCAGTGGAAT GACGATACTC
GGGACAAGCG GATTGGGATA CATAGGAGGA TGGCCCACGA TCTGGGAGCA GATCTTCGTG
CCGTTGAGCG CGGCATTTGT CATTCTGGTG TACGGGACGA AGCTCCATGC CATCTCCGAG
CGGATGGGAT ACATCACCAT ACAGGACTAC CTGGCGCAGA GGTTCTACAG CCAGCGCGGT
CTGCGCGGGC TTTCCGCTGT GGCTGGGATA CTTGTATCGC TGATTTACCT GGTGGGGCAG
TACGTCGCCA TAAGCATGGT CCTGAGCTGG ATGCTCAAGA TCTCATACAC TGATGCGCTG
CTTATCGGCG CCATAATAGT GATGATATAC ACGATCCTGG GCGGGCTCTA CGCTATCGCC
TGGATCTCGC TTGTACAGGG GTTGATGATA CTGATTGGAG TCCTTATCGT ATCACCCTTC
ATCATCCAGT CAGCTGGAGG TCTCACACAT GTCAACAACG TCCTTGCAGG CATAGATCCA
AACTACGTGA AGATATGGTA CCCGCAGATG CACCCACCAT ATGCGAAATA CGCCTTTCTG
ACACCGATGT ACCTGGTATC ATTCTTCTTC CTGCTCACGT TCGGGCTCGC GAGTGCTCCC
CATGTTATAA ACAACGTCCT ATCGGCCAGA AGTCGAAGCT TCTTCAAGTG GTCACCGCTT
GCTGCGTTTG TTCTGTACCT CATCGTGATG TACCTCATCA AGATCTCAGG TTTTGCGTCG
AGGGTGATGG TGGAGGAGGG GATGATTGCG CTTCCCACAA ACGTATCCAA CGCACAGGAT
TACGCATTCG TTGTTGCAGC GATGCACATA TTCCCCCATA CCGCAGGCCC GCTGGTCGCT
GTGATCGTGC TCTCTGCTGT GATGTCCACC ACTGACAGGC TCATGCTCAC CATAGGCAGC
TATGTTGGAT GGGACATCTA TAAGATGTTC TTCAACAAAA AAGCCTCGGA TAGAAGCATA
ACTCTGGTTA GCAGACTGGC GATAGTCTTC TCTGTGATAC TGACGCTGAT CCTGGCCTGG
AGGAAGCCAC CGGAGCTTTT GGCATTCCTG ATATGGATGG GGATAGGCAT AATGCTCGCC
ACGTTCGTGG TGCCGATACT TTCAGGTCTC TACTGGAGGA GGGCGACAAG GGAGGGTGCG
ATAGCCTCCA TGTCTCTGGG ACTCATCGGG GCGCTTGTGG CAGGGTGGTA CCACTGGTTC
GTCTCACCTC TTCCAGTGCA CTTCAGCTTC TATGGATTTC TTCTCTCGAT AGCAGCCATG
GTGGTGGTGA GCCTTCTGAC CAGATCACCT CCTGCGGATG TGCTGGATGA GACAATGACC
GGCATGTACA TTCGCACGAA GAGCAAGCGA TAG
|
|---|
| Protein sequence | MDFNMAIILG LYLVGLLAIG AWASKKVKSS EDFIVAGRNL GFWLLTLMIV ASICSGMTIL
GTSGLGYIGG WPTIWEQIFV PLSAAFVILV YGTKLHAISE RMGYITIQDY LAQRFYSQRG
LRGLSAVAGI LVSLIYLVGQ YVAISMVLSW MLKISYTDAL LIGAIIVMIY TILGGLYAIA
WISLVQGLMI LIGVLIVSPF IIQSAGGLTH VNNVLAGIDP NYVKIWYPQM HPPYAKYAFL
TPMYLVSFFF LLTFGLASAP HVINNVLSAR SRSFFKWSPL AAFVLYLIVM YLIKISGFAS
RVMVEEGMIA LPTNVSNAQD YAFVVAAMHI FPHTAGPLVA VIVLSAVMST TDRLMLTIGS
YVGWDIYKMF FNKKASDRSI TLVSRLAIVF SVILTLILAW RKPPELLAFL IWMGIGIMLA
TFVVPILSGL YWRRATREGA IASMSLGLIG ALVAGWYHWF VSPLPVHFSF YGFLLSIAAM
VVVSLLTRSP PADVLDETMT GMYIRTKSKR
|
|---|
| |