Gene Mthe_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0185 
Symbol 
ID4462752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp180788 
End bp181981 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content55% 
IMG OID639699193 
Productsugar phosphate isomerase 
Protein accessionYP_842624 
Protein GI116753506 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGCC TGTTTGAGAT ATTCCGGGAG GCAACACTCC TGCAATGCGG ATTTCTGGAG 
AAGCTGCTTC GTCTCGATAT GTCTGAGGTT GCGTCTTTCT CAGAGTCGCT GGCATCTTTC
CTGAGCGATA CCGAGAGGAA CAAATTCGTC TATGGGCTTG CTGCAGGCAG AAGCGCCCTC
TCGCTGTACA GCTTCCTTCA GCTCCTGCAG AACCACTTCG ACAATATCTT CCCGTGCACG
CTGGAGGATC CAGTCCAGAG GCACTTCAAT CCGAGGAAGA TGAATCTGGG GATAGCGGTC
TCGGGCTCGG GAGAGACCCC ATCTGTGAAC AAGTACATCG AGGATGTCAT GGGCCAGGGA
GGCGAGATCA AACTGATCAC AGCCAACAGA AACGGCACAG CGTACAGGCT CGTGGAGGAT
TACAAGAACG GCACCATACT TGTGATAGAG GGGAGGACGA AGTACAGCAC CGACAAGGAG
AGACGCTCTC GGCTATCGCC ACTGGGCACG GAGTTCGAGC TCGAGGTCCT GGCGTTCCTC
AACGCCCTCT TCAAGGATAT CCAGGCGAGG CTTGATGGCC ACCATGATGA TCGATGTCCT
GAGTACTGCT CCACGATCCA GGACTTCGAG GAGAACGGAA GGCTCATAGC TGATATGGAT
CAGGAGCATC TCGAGAGGTG GTTTGGCAGG CTCTTTCCGA GGTCGGGGCG CTATGTCATT
GGAGGTGTCG GCAGATCCGG GCTTGTCGCG AGGGCATTCG AGATGAGGTT CACGCATCTG
AACAAGATAA GCTACTGGGA GAGAGACTTC AACACGCCAA GCTTCCAGAT AGGGGATGTG
TACATACCGA TAACAGGCGG GGGTAACACC TACGAGGCGC TTGAGGGCGC GAGGAACGCG
TTCAGGAACG GCGCGGACGT GATGCCGATC ACCGCGAACA GTGGGTCGAA CCTGATGGCG
CTTGTGAGGG AGAAAGGCAG GCTTGATGAT GTTGTTTTCA TACCTGTGAA GAAGGACTAT
GAGGGTCTCT TTAAGGGCAA CAGAAGCACC ACAAGCTGGC TGGTATCCGA GTTCACGAAG
TACAGGTACC CGATATTCGA GATAAACACA TCCATATTCA CAAACAGTGT CGTCGCGGTG
GGCGCTGAGT TCCTGGGCAT AGTCGAGGCC GGGATGCGCA GGCTCCACGT TTAG
 
Protein sequence
MSGLFEIFRE ATLLQCGFLE KLLRLDMSEV ASFSESLASF LSDTERNKFV YGLAAGRSAL 
SLYSFLQLLQ NHFDNIFPCT LEDPVQRHFN PRKMNLGIAV SGSGETPSVN KYIEDVMGQG
GEIKLITANR NGTAYRLVED YKNGTILVIE GRTKYSTDKE RRSRLSPLGT EFELEVLAFL
NALFKDIQAR LDGHHDDRCP EYCSTIQDFE ENGRLIADMD QEHLERWFGR LFPRSGRYVI
GGVGRSGLVA RAFEMRFTHL NKISYWERDF NTPSFQIGDV YIPITGGGNT YEALEGARNA
FRNGADVMPI TANSGSNLMA LVREKGRLDD VVFIPVKKDY EGLFKGNRST TSWLVSEFTK
YRYPIFEINT SIFTNSVVAV GAEFLGIVEA GMRRLHV