| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0175 |
|---|
| Symbol | |
|---|
| ID | 4462157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 166860 |
|---|
| End bp | 168032 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699183 |
|---|
| Product | translation-associated GTPase |
|---|
| Protein accession | YP_842614 |
|---|
| Protein GI | 116753496 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.278003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCAA TAGGGCTTGC TGGAAAGCCG AACGCGGGTA AATCGACGTT CTTCAAGGCC
GCCACTCTGG CGGATGTCGA GATAGCGAAC TATCCATTCA CGACCATCGA TGCCAACCAT
GGCGTCTCAT ACGTGAGAGT GAAGTGCCCG TGTGTGGAGC TCGGCATTGA AGGTGGATGC
GGCAGATGCA TCAATGGCAG CAGGTTTGTG CCTGTGGAGC TCATAGATGT TGCAGGGTTG
GTGCCGGATG CGCATCTGGG GAGGGGCCTT GGAAATGAGT TTCTGGATAG CCTTCGCCTG
GCTGAGGTCG TGATACATGT TCTGGATGCA TCAGGTTCTA CGGATGCTGA GGGGAACCCT
GTTGGCATTG GAAACTACGA TCCTCTGAAG GATGTGGAGT TTCTCAAGCG CGAGATAAGC
ATGTGGCTCT TCGGGATCCT GGAGAGAAAC TGGACAAAGC TGATGCGCCA GTACACCTCT
GAGAAGGCTA AGCCGGAGCA GATCATATAC GAGCAGCTTG GCGGCGCTGG CGTGTCCGAT
AAAGATGTGC GCTGGGCCCT CTCCCGCATG GACTCTGATC CTGCAACATG GAGCGAGGAC
GATCTCAGGA GGTTTGCAGA GCTTCTCAGG CAGTCCAGCA AGCCCATGAT CATAGCTGCC
AATAAGATCG ATCTCGCGCC CAGGGAGAAC ATCCGGAGGC TAATGGAGCT CGATGAGATC
GTTGTGCCTG TGAGCGGTGC TGCGGAGATC GCGCTGAGAA TGGCTGATAA GGCAGGTGTT
ATAAGATACC TCCCTGGGGA TCCTGATTTT GAGATCGTGG GTGAGCTCAA CAGGGCCCAG
AAGGCCGGTC TGGATAAGAT AAGGGTTCTC CTGAAGGAGT ACGGCTCCAC CGGAGTGCAG
GAGTGCATCA ACCGCGCGGT CTTCGATCTG CTCGACTACA TAACCGTATA CCCTGTGGAG
GACGAGAACA AGTTCACCGA CAGAGATGGG GTGGTCCTCC CAGATGCATT TCTCATGAAG
AGAGGATCCA CAGCACGCGA TCTCGCCTAC AGGGTTCATA CAGAACTGGG CGAGAGCTTC
CTCTTCGCGA TAGACGCACG CAGGAAGCTG CGTGTTGGGG AGAAGTATGA GCTGAAGGAC
GGGGATGTCA TAAAGATAGT GGCGACGAAA TGA
|
|---|
| Protein sequence | MLSIGLAGKP NAGKSTFFKA ATLADVEIAN YPFTTIDANH GVSYVRVKCP CVELGIEGGC
GRCINGSRFV PVELIDVAGL VPDAHLGRGL GNEFLDSLRL AEVVIHVLDA SGSTDAEGNP
VGIGNYDPLK DVEFLKREIS MWLFGILERN WTKLMRQYTS EKAKPEQIIY EQLGGAGVSD
KDVRWALSRM DSDPATWSED DLRRFAELLR QSSKPMIIAA NKIDLAPREN IRRLMELDEI
VVPVSGAAEI ALRMADKAGV IRYLPGDPDF EIVGELNRAQ KAGLDKIRVL LKEYGSTGVQ
ECINRAVFDL LDYITVYPVE DENKFTDRDG VVLPDAFLMK RGSTARDLAY RVHTELGESF
LFAIDARRKL RVGEKYELKD GDVIKIVATK
|
|---|
| |