| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0077 |
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| Symbol | |
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| ID | 4463357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 63480 |
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| End bp | 65699 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639699086 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_842519 |
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| Protein GI | 116753401 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGGAAG TCAAAGAACT TCAGCTCAAG GTGGCGAAGG CCTATCCGAA TGACTCGGCC
AGAGGCATAG CCAGGCTTGA TCCGAGCGCG CTCCTCACCC TGCGCCTTTC CCCCGGAGAT
ATCATCGAGA TAGAGGGGAA GAAGATCACA GCCGCGAAGG TCTGGCGTGC GGATAGACAG
GACTGGATTC AGGATTACAT AAGAATAGAT GGCTTCATCA GGCAGAACGC TGGCGTTGGC
ATAAGCGATC GCGTGAAGGT GAGGAAGGCC AGGTACAGCG ACGCTGCCAG GATTGTGCTG
GCGCCGCCCG CTGGCTCACA CATGCAGTTC GGCCCAGACG CGGTGGATAT GATAAAGAGA
CAGACACTGA AGCGTCCTGT AGTCGCTGGT GATATTCTTC CGGTGATGAG CACATCCGGC
CAGGCGTTCC TGGGCAGAAT GGAGGCGATT CCTCTCGTCG TAACAGCCAC CGATCCCGGC
GGGATCGTGG TGATAACAGA CAGAACTGAG ATCCTCCTCA TGGACAAGCC TGCGCGCGGC
GTCGGCTCGA TAAAGGCGAC CGGGGTCACA TACGAGAGCG TCGGAGGGCT GCGGGCAGAG
GTCCAGCGGG TCAGGGAGAT GATCGAGCTC CCCATGAAGC ACCCAGAGGT CTTCAGAAAG
CTGGGGATCG ATCCGCCGAA GGGTGTTCTT CTTTACGGTC CCCCAGGCAC CGGCAAGACC
CTCATCGCGA AGGCGGTTGC CAATGAGAGC GGAGCCAGCT TCTTCAGCAT AGCCGGACCT
GAGATAATGT CCAAGTACTA CGGAGAGAGC GAGCAGAGGC TCCGCGAGAT CTTCGAGGAG
GCGAACAGCA ACACACCATC GATAGTATTC ATAGACGAGC TGGATTCGAT AGCTCCAAAG
CGCAGCGAGG TGACTGGCGA GGTCGAGAGA AGGGTTGTGG CGCAGCTTCT CGCGATGATG
GATGGCCTCA AGGAACGAGG CCAGCTTGTT GTCATAGGTG CCACAAACAG AATAGACGCG
ATAGATCCGG CACTGCGCAG GCCCGGCAGA TTCGACAGGG AGATAGAGAT AGGTGTTCCG
GACAGGGATG ATCGCGTGGA GATACTCCAG ATCCACGTCA GGAACATGCC ACTCGCAGAT
GATGTGAATC TGGAGGAGCT GGCGAACAGG ACACATGGAT TCGTTGGAGC AGACATCGCT
GCTCTCTGCA AGGAGGCTGC GATGAAGGCT CTCCGCAGGT ATCTTCCGGA TCTCGGAACC
GAGGACGACA TACCCCCTGA GATCGTGGAG AGCATGAAGG TGACCAGAGA TGACTTTGAG
ATGGCACTCA AGGAGATCGA GCCGAGCGCG ATGAGGGAGG TTCTGGTGGA ACTCCCGAAG
GTCAGCTGGG ACAGCGTCGG CGGCCTAGGC CAGATCAAGC AGGAGCTGAT AGAGGCGATA
GAGTGGCCTC TTAAGCGACC GGAGAGGTTC GAGCATATGG GGATAAAGCC GCCGAAGGGC
ATACTGCTCT ACGGACCGCC GGGAACGGGC AAGACTCTGA TAGCGCAGGC TGTTGCAAAC
GAGACGAACG CGAACTTCAT CTCCGTCAGA GGTCCGCAGT TGCTCTCGAA ATGGGTCGGG
GAGTCTGAGA GGGCGATAAG GGAGATATTC AGAAAGGCGA AGCAGGTCTC GCCTACGATA
ATATTCTTTG ACGAGCTCGA TGCGATAGCG CCAATGAGAG GCATGGACGA GGGCGCACGT
GTCACTGAAC GTGTCGTCAA TCAGCTGCTT GCAGAGATGG ATGGCCTAGA GGATCTGAAG
AACGTAATAG TGATCGGAGC GACCAACCGG CCTGATATGA TTGACCCTGC GCTCCTCCGC
TCTGGAAGGT TCGACAGGCT GATAATGATA GGTCCGCCTG ATCGCGATGG AAGGTTGGAG
ATCCTCAGGA TTCATGCATC CAGGATTCCA AACTCTGAGG ACGTCAACCT TGAGGAGCTT
GCAGAGCTAA CAGACGGATA TGTCGGTGCA GATCTAGGCG CTTTATGCAG AGAGGCTGTG
CTCCTCGCGC TCAGGGAGAA CGAGAATGCA GAGATAGTCG AGATGAAGCA CTACCTTGAG
GCTCTGAAGA GGGTCAGGCC GAGCGTGGAG GAGAGCATGA TAAGCTACTA CGAGAGGATA
AGCGAGCGTT TCAGGGGTGG CGGCAGGGTC GAGTCGAGCT CTCTCATAGG CTACAGGTGA
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| Protein sequence | MWEVKELQLK VAKAYPNDSA RGIARLDPSA LLTLRLSPGD IIEIEGKKIT AAKVWRADRQ
DWIQDYIRID GFIRQNAGVG ISDRVKVRKA RYSDAARIVL APPAGSHMQF GPDAVDMIKR
QTLKRPVVAG DILPVMSTSG QAFLGRMEAI PLVVTATDPG GIVVITDRTE ILLMDKPARG
VGSIKATGVT YESVGGLRAE VQRVREMIEL PMKHPEVFRK LGIDPPKGVL LYGPPGTGKT
LIAKAVANES GASFFSIAGP EIMSKYYGES EQRLREIFEE ANSNTPSIVF IDELDSIAPK
RSEVTGEVER RVVAQLLAMM DGLKERGQLV VIGATNRIDA IDPALRRPGR FDREIEIGVP
DRDDRVEILQ IHVRNMPLAD DVNLEELANR THGFVGADIA ALCKEAAMKA LRRYLPDLGT
EDDIPPEIVE SMKVTRDDFE MALKEIEPSA MREVLVELPK VSWDSVGGLG QIKQELIEAI
EWPLKRPERF EHMGIKPPKG ILLYGPPGTG KTLIAQAVAN ETNANFISVR GPQLLSKWVG
ESERAIREIF RKAKQVSPTI IFFDELDAIA PMRGMDEGAR VTERVVNQLL AEMDGLEDLK
NVIVIGATNR PDMIDPALLR SGRFDRLIMI GPPDRDGRLE ILRIHASRIP NSEDVNLEEL
AELTDGYVGA DLGALCREAV LLALRENENA EIVEMKHYLE ALKRVRPSVE ESMISYYERI
SERFRGGGRV ESSSLIGYR
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