| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6945 |
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| Symbol | |
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| ID | 4454847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008545 |
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| Strand | + |
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| Start bp | 159575 |
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| End bp | 162469 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639699004 |
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| Product | TrwC protein |
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| Protein accession | YP_840564 |
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| Protein GI | 116687318 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.422553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCA TGCATAATGT CGGCAGCGCC GGCCAGGCGC TCCACTATTT TTCGAAAGAT
AACTACTACA CCACCGATCA GGGACTCGAG CATTCAGCCT GGTTCGGCAA GGGGGCGGCC
ACCCTAGGTC TGAACGGGCA AGTCGATCGC AACGTGTTTT TCAAGTTGCT GTCTGGGCAG
GTCGGCGATC AGCAACTCGG TCGCGTCGTC CTGGACGAGA ATGGCGAGCC CGAGGTTGTG
CATCGACCCG GCATCGACTT GACCTTTTCG GCGCCGAAGA GCGTCAGTAT TGCCGCAGAA
GTTTTCGAAG ATCGCGAGGT CCGCCTCGCG CATGAAGAGG CTGTCAAGGA GGCGCTCGAG
TACGTCGAGG CGTATGTGGC CCGGGCGCGC AAAACGGTCG ATGGCCAGAC GCTAGTGGAG
CCGACCGGCA ATGTAGTAGC CGCCCTCTTT CGACACAACA CGAGCCGAGA TCTCGACCCC
GATACGCATA CTCACGCCCT CGTCATGAAC GCGACCCAAC GCGCGGATGG CGAATGGCGA
TCACTCACCA ATGACGAATT GTACGTGCAG CAGAAGGTGA TCGGCGCAAT CTACACGTCC
TCGCTCGCGC GCGGGTTGCA GAAGCGGGGC TATGCCATCA CGGCACCCGA CGAGAACGGG
AATTTCGAAT TGGTCGGCGT CACTCGAGAG CAAATCGAAC ACTTCAGCCA GCGCTCGGCA
GCGCGCGATC GATGGCTGCG GGCCAACGGA ATCGATCCTG CAAACGCCAC GGCCGCCGAG
AAGGAGCGTG CCGTGCTCGC GACTCGCGAA CGCAAGGTCG GCGTCGACCA TGAGGCCTTG
TCGGTTCAAT GGCGTGAGCG CGCACAAGCA GTCGGCCTCG ACTACAGCGT CATTCAGCAG
AAGGCTCGGG AGGCGCGGGA AGCGGGAACG GATGCACGGG TCGTCAAGTT GTCCGGTATT
GAAGCCCTAC GGTTCGCTGC GTCTCACCTC GGTGAGCGCG AAATCGTGCT GAACCAATAT
GACCTCGTCC AGACCGCGCT CGAGCATGCG GTCGGCCGAA CGTCTCCAAA TCAGATTCTC
GATGCCTACA AAAAGCTGGT CCATCAAGGC AAGATCGTCG ACCTTCCGGA CGGCAACATT
ACCACCGAGA AGATGCTCAA CACGGAGCGC TGGACAGTCG AGAACGCGCT CGCGCAGCGA
GATGTGACGC CGGCGATCGC GCCTGCCGAA TTAGTCCGGT CCAGAATCGA ACAGGCCATC
GCCACCGCGC GTGCGGAGCG GAACGATCCC ACCTTCGACT ACACCCCCGG TCAGCGAGGC
GCGATCGAGC ATGCGCTGAC GGGCAGAGAC CGGATCGTCG CGGTGCAGGG GCTCGCCGGC
GTAGGCAAAA CCACGATGGT CAAGGGAACA GTCCAGGTCG CGCACGAGCA GGGTTGGCTT
GTACGAGGGA TGGCCGCAAC CGGCCAGGCT GCCAAGCAGC TCGAAAACGA CTCCGGTATC
CAGGCCGATA CGGTTACGAT GTTCGAGATT CATGAGCAGC GGCGCCAGGA TGATTTGAAG
GTCCTGCGCG AGTATGTGCC GGACCTATCA CGAGAGCGCG AGCTCTGGCT CGTCGACGAG
TCATCATTCC TCGCCCAACG GCAAATGGCT CGCCTATTTA AGATGGCGGA ACGAGCGGAT
GCGAAGGTCA TCCTCCTTGG CGACCGCCTC CAGCTGCAGG CCATCGAGGC GGGCAAACCG
TTTGAGATCC TGCAGGACGA GGGCGTGGCC ACCGCTCAGA TGACCCAGAT CCAGCGCCAG
AAGAATCCCG AGCTGCAGCA GGCAGTCGCG ATCACCGTGG GCACCGCCGA CCTTGCACCG
GATGAGCCCC TCACCGACCT GAACCTCGCA CGTAACGCTC GCGCCTTCGA CTTTCTCGAG
CAAGCTGGGC GCGTGACGGA ACACGAGGAT CCGCGAGACC TGATCGACCT GATGGCGCGC
CAGTACGTCG ACCGGGGACC ACGAAGAAAT CAGACGATCA TCATCACCCC GTTTAACGAG
GACCGCGTCG AAATCAACAA TGCGGTTCGG GCGGAGCTGC AGGAGCGTGG CGAGCTCGAT
GTCAACGACT CGGCACACAC CATCTTCCGG TCCGATGGAG ATATGACCCG GGCCAAGCAG
AAGGAGGCGC AGTACTACAC TAAGGATATG ACCGTCCGGT TCGGTCGAGA CTATCAGAAA
ATACTCGCCT CCCGCGGCGA ATACATGCGC GTTGTGGGTA CGCGACCCGA CGAGGGTATC
GTCGTTCTGC GGAAGTCCGA CGGGTCTCTC ATGGAATGGG AACCGAAGAA GTACAACCGG
GTAGAGGTGT ATCTCTCGGA AACGAGGAAT CTCGCCGCGC GTGACGTCAT TCGCTTCACC
CGCGGCGACG AGCTCGTCAA GAATGGTCAC GAGGCGACCG TCGTTTCTGT CAACGAGAAC
CAGGCGGTCC TGCGGCTCGC GGATGGCAAG GAAATTCCTT GGGATCTCGA CGCGCAGCGT
CATTGGGATC ACGCGTATGC GGTGACGGTT CACGCAGGCC AAGGCGCGAC CCGCGAGCAA
GCCATGCTGC ATATCCCGTC ACACAAAATG GAGCGTGATC CGGAAGATGC TCGGCGCCAG
TCAGACGTCG CGATGACGGT GCGTAGGATC TTCGGTGACC GGAGCTTCTA TGTCGGGCTC
ACCCGGGCGG TCGAGGATCT CCAGATTTTC ACGACCGACG CAATTCTCGC TCGAGCGGCC
GTCTCACGCC ACCAGGACAA GTCAAGCGCC ATCGAGACGC TGCGTGAGCA TGAGTTGGGC
GAGCAGGCGA ATACCCAGCC GCAGCGCCAG CGACGTCAAC AAGCTGCGCA ACAGATGCAG
ATCGAGCCGG ACTGA
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| Protein sequence | MMSMHNVGSA GQALHYFSKD NYYTTDQGLE HSAWFGKGAA TLGLNGQVDR NVFFKLLSGQ
VGDQQLGRVV LDENGEPEVV HRPGIDLTFS APKSVSIAAE VFEDREVRLA HEEAVKEALE
YVEAYVARAR KTVDGQTLVE PTGNVVAALF RHNTSRDLDP DTHTHALVMN ATQRADGEWR
SLTNDELYVQ QKVIGAIYTS SLARGLQKRG YAITAPDENG NFELVGVTRE QIEHFSQRSA
ARDRWLRANG IDPANATAAE KERAVLATRE RKVGVDHEAL SVQWRERAQA VGLDYSVIQQ
KAREAREAGT DARVVKLSGI EALRFAASHL GEREIVLNQY DLVQTALEHA VGRTSPNQIL
DAYKKLVHQG KIVDLPDGNI TTEKMLNTER WTVENALAQR DVTPAIAPAE LVRSRIEQAI
ATARAERNDP TFDYTPGQRG AIEHALTGRD RIVAVQGLAG VGKTTMVKGT VQVAHEQGWL
VRGMAATGQA AKQLENDSGI QADTVTMFEI HEQRRQDDLK VLREYVPDLS RERELWLVDE
SSFLAQRQMA RLFKMAERAD AKVILLGDRL QLQAIEAGKP FEILQDEGVA TAQMTQIQRQ
KNPELQQAVA ITVGTADLAP DEPLTDLNLA RNARAFDFLE QAGRVTEHED PRDLIDLMAR
QYVDRGPRRN QTIIITPFNE DRVEINNAVR AELQERGELD VNDSAHTIFR SDGDMTRAKQ
KEAQYYTKDM TVRFGRDYQK ILASRGEYMR VVGTRPDEGI VVLRKSDGSL MEWEPKKYNR
VEVYLSETRN LAARDVIRFT RGDELVKNGH EATVVSVNEN QAVLRLADGK EIPWDLDAQR
HWDHAYAVTV HAGQGATREQ AMLHIPSHKM ERDPEDARRQ SDVAMTVRRI FGDRSFYVGL
TRAVEDLQIF TTDAILARAA VSRHQDKSSA IETLREHELG EQANTQPQRQ RRQQAAQQMQ
IEPD
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