Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6920 |
Symbol | |
ID | 4454924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008545 |
Strand | + |
Start bp | 136786 |
End bp | 138162 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639698981 |
Product | glycoside hydrolase family protein |
Protein accession | YP_840541 |
Protein GI | 116687295 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5434] Endopolygalacturonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA AAAGCAGCAC GCGCCTCGTC CTAATGCTCT CCGCCTTGGC CGCGCTCGCC GTGCAAGCGT CCGCACAAGC GGCCACCTGC ACGCCGCAGT GGAGCAGTTC GGCCAGCACC AACACCACGA ATCTGCAGAA CGCCATCCAA CAGTGCGCCG CCAGCGGCAC CAGCAGCAGT CCGGGCCTGG TCGACCTGGC CAGCAACAAC GGCATCTCGA CGGCGGTCAT CACCAGCGTG AATCTCGCCA GCAATATCGT GCTGAAGTTG GAGAAGGGCT TCACGCTGAA GGGCTCGCCC GCGCAGCCCT CGAGCGGCGC AATGCTGACC GGCAGCAATC TGAGCAACCT GACCATTACC GGCACCGGCG CGATCGACGG CGACGGACAG GACTACTGGC CTGCCGCAGT CGGGCAGAAC AATACGGCCC GGCCCAAACT GATCGCCATC ACCGGCTCAA ACCTGCAGAT TGGCTCGAAC TTCACCGATG CCGGCAAATC GCAGTCGATC GTGGCCTTCC CGAGTTCGTC CAATGCTACC GGCAGCGCAC TGATCATCCG CAACTCGCCG AAGGAGCAAC TGGTGATTGA ATCGGGCTCG AAGAACGTCA CGATCGACGG CGTGTGGATC TACGCGAATC CGAACCGCAA TGCCAGCGGT GACGATCTCG CGCCGAACAC CGACGCGATC GACATCATCG GCACCCAGAC GGCGACCATC AAGAACTGTC TGCTCGACAC CGGCGACGAC GATATCGCCA TCAAGTCAAA CGCGGGCGGG GCGGCCACCT CGAGCGTCAA CGTCAGCCAT TGCGTGGTGG GCGGTGGTCA TGGCATCTCG ATCGGCGGCC AGGAGGCGGC CGGCACCACG CTCGCCAAGC CCGGCGTCTC GCAGGTGACG GTCGACACGA TGCAGTTCAG CGGCACCGAC TACGGCTACC GGATCAAGAC CGACCAGACC GCCAAGGACA GCGGTGCCAC CACCGGCGTG ACCTACCGGA ACACCTGCAT GCGCAACGTC CAGCAGCCCT TCCTGTTCAC CTACGCCTAC GCCTCGGGCA CCGGCGGCGC CCTGCCGATC ATCGCCAACG TCACCATCGA CAACGTGATC GCCACCGCCA CCAAGCAGCA AGGCGCCATA ATCGGGCTCT CGAACAGCCT GATGGGCGTG CCAAAATCGG GCGACACGGG AATCAGCATC ACCAATAGCC AGATCAGTGG CGGTAAGGCC TTCTCCGTGA CCGACGGCGA ATTGCAACTG GGCAGCCACA GCAGCGCGAC GACCTCGACC GGTTCGAACG GACAAGTAGT GGGGATTCCG GATACCGGCG CGACGCTGTC CTGCCCGAGC AGCATCACGA TCCCTGCGCA GATTTGA
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Protein sequence | MKGKSSTRLV LMLSALAALA VQASAQAATC TPQWSSSAST NTTNLQNAIQ QCAASGTSSS PGLVDLASNN GISTAVITSV NLASNIVLKL EKGFTLKGSP AQPSSGAMLT GSNLSNLTIT GTGAIDGDGQ DYWPAAVGQN NTARPKLIAI TGSNLQIGSN FTDAGKSQSI VAFPSSSNAT GSALIIRNSP KEQLVIESGS KNVTIDGVWI YANPNRNASG DDLAPNTDAI DIIGTQTATI KNCLLDTGDD DIAIKSNAGG AATSSVNVSH CVVGGGHGIS IGGQEAAGTT LAKPGVSQVT VDTMQFSGTD YGYRIKTDQT AKDSGATTGV TYRNTCMRNV QQPFLFTYAY ASGTGGALPI IANVTIDNVI ATATKQQGAI IGLSNSLMGV PKSGDTGISI TNSQISGGKA FSVTDGELQL GSHSSATTST GSNGQVVGIP DTGATLSCPS SITIPAQI
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