| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6385 |
|---|
| Symbol | |
|---|
| ID | 4453928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 584352 |
|---|
| End bp | 585404 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639698449 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_840009 |
|---|
| Protein GI | 116686762 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.684149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAG CTGCATTTGT CCCTGTTTTC AGGTTCCGCA CGACCGACTA TCCCGAGCCG
GACCGGTTCC ACGTCTGGGT CAAGGACATG CTGTGCGACT ACCGGCTCGA CGACGACGGC
GGCCACGGCC CGTGCGACGC GGAAGCAACC GGCGCGGCGC TCGGCCCGCT GATCTTGTCC
GGCCGGCACT GGCACTCGCG CGCGCCGACC TATACGGTGC GCCGCACGCC GCGGCGAATC
CGGCTCGACG GGCAGGATTC GATCCGCTTC ACGCTGCTGC TCGGCGGGCG GCTGGCGAGC
CATACCGGCG GGCCCGAATT GATCAAGGGC GCCGGCGACC TGTTCGTCTA CGACGTCGCG
CAGATCAACG ACTGCAAGGT CGAGGCCGGC GACGTGATCA GCCTCGTCGT GCCCCGCTAT
CTGCTGCCGG CCCATGCAGC CCAGGCGCAC GGCCAGACGC TGACGAGCGG CGTGGGCCGG
CTGGTCGCCG ACCAGATGCT GTCGCTGTTC CGCAACCTGC CGAACCTGCG CATGCAGGAC
GTGCCCAGCA TCGTCCAGTC GATGCTGTTG CTGCTGGCCG CGGCGGTGTC GCCGAGCGCG
CAGGCGTTGA ACGACGCACG CGGCCCGATC GACCATGCGC TGGTCGATCG CGTGCGTCGC
TACATCGACC TGCATTTGCT GGAGCCGGAC CTCACGCCCG AACGGATCTG CCGCGACATC
GGCGTGTCGC GGGCGCGGCT CTATCAGTTG TTCAAGGAAG AGGGCGGCGT GATGCGGCAG
ATCACGCGGC GGCGCTTGCG TCACGCGTAT CACGTGCTCG GCGATCCGCA GCGCCGGCAT
CAGCGCATTG CGGAAATCGC GTGGGCGCAC GGCTTTCCCG ACGAGAAATA TTTTCACCGG
TTGTTCAAGG CGGAATTCGG CCACACGCCG AAGGAGACGC TCGAGTGCGC GGCCGCGCCG
ATCCTGCTGC CGTGCGGTGC AACCGATGCG CGCTGGGGCG ACGGCGGCCG GCTGGCGGGA
TGGACGCTGC CGTTCGGGGT GCTCACCAAC TGA
|
|---|
| Protein sequence | MDQAAFVPVF RFRTTDYPEP DRFHVWVKDM LCDYRLDDDG GHGPCDAEAT GAALGPLILS
GRHWHSRAPT YTVRRTPRRI RLDGQDSIRF TLLLGGRLAS HTGGPELIKG AGDLFVYDVA
QINDCKVEAG DVISLVVPRY LLPAHAAQAH GQTLTSGVGR LVADQMLSLF RNLPNLRMQD
VPSIVQSMLL LLAAAVSPSA QALNDARGPI DHALVDRVRR YIDLHLLEPD LTPERICRDI
GVSRARLYQL FKEEGGVMRQ ITRRRLRHAY HVLGDPQRRH QRIAEIAWAH GFPDEKYFHR
LFKAEFGHTP KETLECAAAP ILLPCGATDA RWGDGGRLAG WTLPFGVLTN
|
|---|
| |