Gene Bcen2424_6380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6380 
Symbol 
ID4453923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp578300 
End bp578950 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID639698445 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_840005 
Protein GI116686758 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCC ATTACCCGCT GCTGTTTGCC TATCTGGCCG CGATCGTGCT GCTCATCGCG 
ACGCCCGGCC CGGTCGTCAT GCTCGTCACG GGCACGGTTG CGCGGCGCGG GTTCCGTCAA
GGCGTGCTGA CCGCGGTGGG CGCGAATGCG GCGAGCCTCG TGCTGATCGC GGGCGCGATG
CTGATGGTGT TCGGCGTCGT GATGGTCAGC GCTCGGCTGC TCGCCGGGCT GCACGTCGCG
GGTTGCCTGT TCATCGCGGT GCTCGCGATC CGGACGCTGG TCGGCGAATG GCGCGCCGGT
CGCGGGCGCA GTGGCGACGG CACGGCGGCG GGCGAACCGG CGTCACGGCC GCGCGGGTTG
CCCGGCGTCG TGCGCGGCTT CCTCGTCGGC ATCGCGAATC CGAAGGATGT GCTGTTCTTC
GTCGCGTTCT TTCCGCAGTT CGTCGGCATC ACGCCCGATT CGCGCGTGAG CCTCGCGATC
CTCGCTGCGT TGTGGATCGC GGTCGATTTC ACGATCATGA CCGGCTACAT GGCCGCGATC
AACCATCCGG CGATTCATCG GAAGCAGCGG TGGATCTCGG CGTCGTCGGC GCTTGCGCTG
CTCGCGATTG CGCTCGCCGG GCTCGGCGGC ACGATCGCGA GCGTCGCGTA G
 
Protein sequence
MTLHYPLLFA YLAAIVLLIA TPGPVVMLVT GTVARRGFRQ GVLTAVGANA ASLVLIAGAM 
LMVFGVVMVS ARLLAGLHVA GCLFIAVLAI RTLVGEWRAG RGRSGDGTAA GEPASRPRGL
PGVVRGFLVG IANPKDVLFF VAFFPQFVGI TPDSRVSLAI LAALWIAVDF TIMTGYMAAI
NHPAIHRKQR WISASSALAL LAIALAGLGG TIASVA