Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6351 |
Symbol | |
ID | 4454723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 543347 |
End bp | 545332 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639698416 |
Product | amidohydrolase 3 |
Protein accession | YP_839976 |
Protein GI | 116686729 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.056207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGC GTGCGGTGCG GCCGCTTTCC CCCGTTCGAC GACCAGCAGG GCGGCCCGCG CCGCGCCGCG CGCAGGCGCG TACCGGAGGC CCGACGGTGC TTAGAGCGAC GGAACCCGCG CGTTCGGCGG ACCTCGTCGT GTTCAACGGT AAGATCGCGA CCCAGGACGA ACAGCGCTCG TTCGTCCGTG CGCTCGCCGT GAAGGACGGG ACCATCGTCG CGACCGGCGA CGATCGCGAC GTGCTGCGCC ATGCGCACGA CGACACCGCC TGTATCGACC TGCACGGCCG TACCGTGATT CCGGGCCTGA TCGATGCGCA CCTGCAGGCG ATCCGCGGCG GCATGAACTT CAACCTCGAG GTGCGCTGGG ACGGCGTGCC GTCGCTGGCC GACGCGCTCG AGCTGCTGGG CCGGCAGGTA CGACGCACGC CCGCGCCGCA CTGGGCGCGC GTGGCGGGCG GCTGGACCGC GCTGCAGTTC GCGGAAAAGC GCGGGCCGAC GACGGCCGAG CTCAACGCGA TCGCGCCCGA CACGCCGGTA TTCGTCCAGC ATCTGGCCGA CAGTGCGTGG CTGAATGCGG CCGCGCTGCG CGCGCTCGGC TACGGGCGAG ACACGCCCGA TCCGCCCGGC GGCGAACTGC GGCGCGACCG CCATGGGCGG CCGACCGGGC TGCTGCTCGC GCGTCAGGAC CCGGCGGTGC TGGACGCGGT GCTCGCCCGC GCGCCGACGC TCGATGCGGC CGACCGGGTC AACTCGACGC GGCAGTTCAT GCACGCGCTG AACCGCGTCG GCGTGACGAG CGCGATCGAC GCCGGCGGCG ACGGCCTCGC GTATCCGGAC GACTATGCGG CGGTCGCGAC GCTCGCGCGG CGCGGCGAAT TGACGACGCG CATCGCCTAT GCGCTGGGCG CGCGGCACGC GGGCCGGGAG CTCGACGACT TCGCGAAATG GATCGCGCTG ACCGCGCCCG GCGACGGCGA CGCGTTCCTG CGCGCGAGCG GCGCGGGCGA GCGATTGCTG TTCTCGGCGG TCGATCTCGG GAATTTCCTC GAACCGCGCA TCGAGTTGCC CGCGTCCGTC GAGGTCGAAC TGGCGGCCGT CGTCCGGCTG CTCGTGCATC ATCGCTGGCC GTTCCGGCTC CAGGCGACCT ACGACGAATC GATCGGCCGC TTTCTCGACG TGTTCGAAGC GGTGGATCGC GACACGCCGT TCGACGGGCT GCGCTGGTGC TTCGACTGCT GCGAGACCAT TTCGGACGCC AATATCGCGC GGGTCGCGGC GCTGGGCGGC GGCATCACCG TGCAGCCGCG CATGGCGTTC CAGGGCGAAG CGTTCATCGC GCGCCATGGT GCGGCGGCGG CCACGCGCGC GCCGCCGCTC CGCGCGATGC TCGCGGCCGG GCTGCCGGTC GGCGCGGGGT CCGGCGCGAC GGGCGCGGCG AGCTACAACC CGTTCGTCGC GCTGTACTGG ATGGTGTCGG GGCGCAGCGT GGGCGGCACC GCGCTGTATC CGGCGCGCAA CCGGCTCGGC CGGATGGAGG CGCTGCGCCG CTACACGGCC GGCAGCGCGT GGTTCTCCGC GGACGAGCAT CGCAAGGGCG CGCTGGTGCC CGGCCGGTAC GCCGATTTCG CGGTGCTGAG CGACGATTAC TTCACGATCG ATGTGCGGCG CATCCCGACG CTGTCGTCGG TGCTGACGGT CGTCGACGGC AGGGTCGTGC ACGCGGAACA GGAATTCTCG CCGCTTGCGC CGCCGCCGCC GCCCGTCAGC CCTGCGTGGT CGCCGGTCGC CGCAGACGGC GCGGTGGGCG CCGACGTGCG CGACCGTTCG CATGCGTCGG CGTCGGGCGA CGCGTGCGGG GTGCCCGGCG TCGATGCGTG CCGTGCGCGC GGTGATGGAC GCCGCTTCGC GCGACCGCGC TATCCGACGG CAAGCGCGGC CGCCGAGCGC TGCGAAGCCT TCGGCCGCTG CTGCGTCGCG TTTTGA
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Protein sequence | MPMRAVRPLS PVRRPAGRPA PRRAQARTGG PTVLRATEPA RSADLVVFNG KIATQDEQRS FVRALAVKDG TIVATGDDRD VLRHAHDDTA CIDLHGRTVI PGLIDAHLQA IRGGMNFNLE VRWDGVPSLA DALELLGRQV RRTPAPHWAR VAGGWTALQF AEKRGPTTAE LNAIAPDTPV FVQHLADSAW LNAAALRALG YGRDTPDPPG GELRRDRHGR PTGLLLARQD PAVLDAVLAR APTLDAADRV NSTRQFMHAL NRVGVTSAID AGGDGLAYPD DYAAVATLAR RGELTTRIAY ALGARHAGRE LDDFAKWIAL TAPGDGDAFL RASGAGERLL FSAVDLGNFL EPRIELPASV EVELAAVVRL LVHHRWPFRL QATYDESIGR FLDVFEAVDR DTPFDGLRWC FDCCETISDA NIARVAALGG GITVQPRMAF QGEAFIARHG AAAATRAPPL RAMLAAGLPV GAGSGATGAA SYNPFVALYW MVSGRSVGGT ALYPARNRLG RMEALRRYTA GSAWFSADEH RKGALVPGRY ADFAVLSDDY FTIDVRRIPT LSSVLTVVDG RVVHAEQEFS PLAPPPPPVS PAWSPVAADG AVGADVRDRS HASASGDACG VPGVDACRAR GDGRRFARPR YPTASAAAER CEAFGRCCVA F
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