Gene Bcen2424_6153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6153 
Symbol 
ID4454428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp311476 
End bp312123 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID639698213 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_839778 
Protein GI116686531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.757704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.682937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGT CCGGATCGCT CTACGGGTTT CTCGTCATCG GCGGCATGCT CGCGGTCACG 
CCGGGGCCGA ACATGGTCTA CGTGATGTCG CGCTCGATCG CGCAAGGGCG GGCGGCGGGC
CTCGTTTCGC TCGCGGGCGT GATGCTCGGC TACCTGTTCT ACATGTTCGC CGCGGCGTTC
GGCATCACGA CGCTGTTCAT GAGCGTGCCC TATGCGAGCA GCGTGCTGGG CGCGGTCGGG
GCGACCTATC TGCTGTACCT CGCATGGCAG GCGGTGCGGC CCGGCGGCCG CTCGCCGTTC
GAGGTGAAGA CGCTGCCGAA CGAGCAGCCG CTGCGGCTGC TCGCGATGGG CGCGACGACC
AGCGTGCTGA ACCCGAAGCT CGCGATGCTG TTCGTGTCGC TGTTGCCGCA GTTCATCGAC
TACGGGCATG GCAGCGTGTT CGGCCAGTCG CTGTTTCTGG GCTCGCTACT GATTGCCGCA
TTCGCGTCGG CCAACGGGCT GGTGGCGATC TGCTCGGGCA GCCTGGCGAA GTTCCTGCAC
GGCCGCCCGA CGCTGCTGCT CGCGCAGCGC TGGGCAATGG GCGCGGTGCT CGGCGGCCTC
GGCGTGGAAA TGCTCGTCGA GGCGTCGAAG TCGGCGGGCA TCGCGTAA
 
Protein sequence
MQTSGSLYGF LVIGGMLAVT PGPNMVYVMS RSIAQGRAAG LVSLAGVMLG YLFYMFAAAF 
GITTLFMSVP YASSVLGAVG ATYLLYLAWQ AVRPGGRSPF EVKTLPNEQP LRLLAMGATT
SVLNPKLAML FVSLLPQFID YGHGSVFGQS LFLGSLLIAA FASANGLVAI CSGSLAKFLH
GRPTLLLAQR WAMGAVLGGL GVEMLVEASK SAGIA