Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6153 |
Symbol | |
ID | 4454428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 311476 |
End bp | 312123 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698213 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_839778 |
Protein GI | 116686531 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.757704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.682937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGT CCGGATCGCT CTACGGGTTT CTCGTCATCG GCGGCATGCT CGCGGTCACG CCGGGGCCGA ACATGGTCTA CGTGATGTCG CGCTCGATCG CGCAAGGGCG GGCGGCGGGC CTCGTTTCGC TCGCGGGCGT GATGCTCGGC TACCTGTTCT ACATGTTCGC CGCGGCGTTC GGCATCACGA CGCTGTTCAT GAGCGTGCCC TATGCGAGCA GCGTGCTGGG CGCGGTCGGG GCGACCTATC TGCTGTACCT CGCATGGCAG GCGGTGCGGC CCGGCGGCCG CTCGCCGTTC GAGGTGAAGA CGCTGCCGAA CGAGCAGCCG CTGCGGCTGC TCGCGATGGG CGCGACGACC AGCGTGCTGA ACCCGAAGCT CGCGATGCTG TTCGTGTCGC TGTTGCCGCA GTTCATCGAC TACGGGCATG GCAGCGTGTT CGGCCAGTCG CTGTTTCTGG GCTCGCTACT GATTGCCGCA TTCGCGTCGG CCAACGGGCT GGTGGCGATC TGCTCGGGCA GCCTGGCGAA GTTCCTGCAC GGCCGCCCGA CGCTGCTGCT CGCGCAGCGC TGGGCAATGG GCGCGGTGCT CGGCGGCCTC GGCGTGGAAA TGCTCGTCGA GGCGTCGAAG TCGGCGGGCA TCGCGTAA
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Protein sequence | MQTSGSLYGF LVIGGMLAVT PGPNMVYVMS RSIAQGRAAG LVSLAGVMLG YLFYMFAAAF GITTLFMSVP YASSVLGAVG ATYLLYLAWQ AVRPGGRSPF EVKTLPNEQP LRLLAMGATT SVLNPKLAML FVSLLPQFID YGHGSVFGQS LFLGSLLIAA FASANGLVAI CSGSLAKFLH GRPTLLLAQR WAMGAVLGGL GVEMLVEASK SAGIA
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