Gene Bcen2424_6003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6003 
Symbol 
ID4454749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp150788 
End bp151498 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content71% 
IMG OID639698063 
ProductABC transporter related 
Protein accessionYP_839628 
Protein GI116686381 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG CGTCCCTCGC CCCGGTGCTC GAACTGCGCG ACGTCACGCG CACATACGAA 
GGCGCGGGCC GCGTCGTCGC GGTGCGCGGC GCGACGATCT CGATCGGGCG GCGCGACGTC
GTCGCGCTCG TCGGGCCGTC GGGCAGCGGC AAAAGCACGC TGCTCAACCT CGCCGGCTTT
CTCGACGTGC CGACGAGCGG CGAACGCTGG CTCGAAGGCC GCCGCATCGA CGACGCGCCG
GACACGCTCG AACGAATTCG CCGCGAACGC ATCGGCTTCG TATTCCAGCA ATTCAACCTG
ATTCCGGTGA TGTCGGCGCT CGAGAACGTC GAGCTCGGCT GCTTCGCATG GGGCACGCCG
CGCACGCGGC GCGAACGCGC CCGCGCGATG CTCGACGCGG TCGGGCTCGC CGCGCGCGAG
CGGCACCGCC CCGGCGAGCT GTCCGGCGGC GAGCAGCAGC GCGTCGCGCT GGCCCGCGCG
CTCGCCAAGG AGCCGGCGAT CGTGATCGCG GACGAGCCGA CCGCGAGCCT CGACAGCACC
AACGCGCGGG CGGTCGCCGA GCTGATCCTC GACACCAACC GCACGCTGGG CACCGCCTTT
CTGATTGCGT CGCACGACGA TCGTCTGTGC GCGCACCTGC CGCGCCGCAT CGAGATGCGC
GACGGCGTAC CGGGAGTGAA TCGTGAACTG GTCGACGTTT GCGTGGCGTA A
 
Protein sequence
MTAASLAPVL ELRDVTRTYE GAGRVVAVRG ATISIGRRDV VALVGPSGSG KSTLLNLAGF 
LDVPTSGERW LEGRRIDDAP DTLERIRRER IGFVFQQFNL IPVMSALENV ELGCFAWGTP
RTRRERARAM LDAVGLAARE RHRPGELSGG EQQRVALARA LAKEPAIVIA DEPTASLDST
NARAVAELIL DTNRTLGTAF LIASHDDRLC AHLPRRIEMR DGVPGVNREL VDVCVA