| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5983 |
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| Symbol | |
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| ID | 4454711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 124247 |
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| End bp | 128662 |
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| Gene Length | 4416 bp |
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| Protein Length | 1471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698044 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_839609 |
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| Protein GI | 116686362 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00228839 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGT CGTTCAAGTC GATCTGGAAC GAAGCACTGG GGGCCTGGGT TGCGGCTTCG
GAGCTTGACC GCGCACGCGG CAAGCGTGTT GCGTCGTCGA CGCGCGCGCC GGAATGCGCC
GCGCACGGAG AAGCCGCGAC GCACGCGGAC ATACCATCGG CGCCTTCGGT GTTGAAGCTG
GCCGTGCTGA CGGCGACTGC TTGTCTCGGG TTGTTCCATG CGAGTGCGCA TGCGCAATAC
GCGCAGGATG GCGGTACCGC GTCGGGCGGC ACGACGGCGA TCTCGATCGG CCTCGGTTCG
ACTGCCGCGC AGCAGAATTC CACCGCGGTC GGCAACCTGT CGACGGCGCA GGGTTTGTCG
GCCACGGCGC TCGGCCCGGG CGCACATGCG ATGGGCGATG GTTCGACGTC CGTCGGCATC
AACTCGCAGG CGACCGGCGT CAACAGTTCG GCGCTCGGCG TGCAGGCGAT CGGTTCCGGC
GACTATTCGG TCGCGATCGG CAACCTGTCG AGCGCGACCC AAAGCGGCGC GGTCGCGATG
GGCAGCGGCG CGGCGGCGAC CGGTGTTTCC GCCGTCGGGC TGGGCAACAA CGCGCTGGCG
TCCGGCCAGT ACGCGGCGGC GATGGGGCTC GGTGCCAGCG CGGCGGGCGC GCAGAGCGTC
TCGCTCGGCT ATGCGTCGCA TGCTACGAAC ACGGGCTCCG TCGCGCTCGG CAACCAGTCG
ACCAGTTCGG GCGCGGCCGG CGTGGCCGTC GGCAGCGGTG CGCTGACGAC CGGGAATTCC
GGCGTGGCGA TGGGCGTGAA CAGCGGGGCG AAGGGCACCG CGTCGATCGC GATCGGCTGG
GGCGGCACCG CCGGCGTGCC CGGGTCGGGC ACGCAGTCGC TCGGCACGAG TTCGATCGCG
ATGGGCTCGA ACACGAATGC CGGCGCCGAT CAGGCGCTGG CCTTCGGCCT GAACGCCAAT
GCGTCGGGCG TCAGTTCGAT CGCGATGGGT GTGCAGTCGA CCGCGACCCA GCAGTTTGCG
ACCGCGCTCG GCAATCTGTC GCTGGCGACC GGTGTTTCCT CCAGCGCGCT GGGGCCCGGG
GCGACGGCGT CGGCCACGAA TGCGACGGCG GTCGGTATCA ACAGCGTCGC GGCGGCGACG
TCGACCGTGG CGATCGGCGA TTCCAACTCG GTTGCCGCGG CGGCAGGCGC GGGTTCGGTC
GCGGGCGGCT ACGGCTCGAA GGTGCTGGGC GGTATCGGCG CCGTCGCGCT GGGCTATGGC
CAGACGGTGA GCGGCAACGG CGCGGTAGCG ATCGGCGATC CGAGCACCGC GATCGGCACC
GGCGCGGTCA CGATGGGGTC GAACAACACC GCGAACGGCG ACGGCGCGGT AGCGATCGGC
AACACCAACA ATGCGCAGGG CACGGGTTCC CTGGCGCTCG GCAATACGTC GACGGCAGCG
GCGGCGGGCG CCGTCGCGTT CGGCGCGTCG GCCGTCGCCA ACAACGCAAA CGATGTCGCG
CTCGGCTCGG GATCGACGAC GGCCGCGCCG AATCCGACGG CCAGCGCGGT CATCGGCGGC
GTCACGTACA ACTTCAACGG CATCAACCCG GCGAGCGTCG TCAGCGTGGG GAATGTCGGC
GCCGAGCGCC AGATCACCAA CGTCGCGGCC GGGCGGATCA GTTCGTCGAG TACGGACGCG
ATCAACGGGT CGCAACTCGC CGCGACGAAT ACGGCGCTCG ATTCATTGTC GACGTCGACG
GCGTCGAGCA TCACGTCGTT GTCGACCGGG GTTTCGTCGC TGTCGACCGG TCTGAGTTCG
ACCAATAGCG CGGTGACGTC GTTGTCGACT TCGACGTCGA CCGGGATCAG TTCGCTGTCG
ACGGGGCTGA GCTCGACCAA TAGCGCCGTG ACATCGCTAT CGACTTCGAC GTCGACCGGC
ATCAGCTCGT TGTCGACCGG CCTGAGTTCG ACCGACAGCA CGGTGACGTC GCTGTCGACG
TCGACATCGA CGGGGCTGTC GTCGGCCAAT AGTTCGATCG CGTCGTTGTC CACCTCGACC
TCGACGGGCA TCGGTTCGTT GTCGACCGGG CTGAGTTCGA CCGACAGTAC GGTGACGTCG
CTGTCGACGT CGACCTCGAC GGGGCTGTCG TCGGTCAATA GTTCGATCAC GTCGTTGTCC
ACCTCGACGT CGACGGGTAT CGGTTCGCTG TCCACCGGCC TGAGTTCGAC CAACAGTGCG
GTGACCTCGC TGTCCACGTC CACGTCGACG GTCGTCGGAT CGTTGTCCAC GGGCTTGAGT
TCGACCAACA GCTCGGTGAC GTCGCTGTCC ACGTCGACCT CGACGGGCAT CAGCTCGCTG
TCCACCGGCC TGAGTTCGAC CAACAGTTCG GTGACGTCGC TGTCCACGTC GACGTCGACG
GTCGTCGGCT CGTTGTCCAC CGGCCTGAGC TCGACCAACA GCAACCTGAC CTCGCTGTCC
ACGTCGACCT CGACCGTCGT CGGCTCGCTG TCCACCGGCT TGAGTTCGAC CAACAGCTCG
ATCACGTCGC TGTCCACGTC GACGTCGACG GTCGTCGGTT CGTTGTCCAC CGGCCTGAGT
TCGACGAACA GCAATTTGAC CTCGTTGTCG ACCGCCACGT CGACCGGGAT CAGCTCGCTG
TCGACGGGCC TCAGCTCGAT TGCGAACAAC AACACGAACC TCGGCAACAG CACGGCCGGC
GCGATCGGCG GCGGCGCCAC CTACGATCCG ACCACCGGCA CGATCTCGTC ACCGTCGTAC
GTGACGTACA ACAGCGACGG CTCGACGACG ATCAACAACA ACGTCGGCTC GGCAATCGAC
AACATCAACG CGAACGGCAT CAAGTACTTC CACGCGAACT CGACCGCGCC GGACAGCCAG
GCGCTCGGCC TGGACAGCGT CGCGATCGGA CCGAACGCGA TCTCGCGCGT GGACGGCAGC
ATCGCGCTCG GCTCCGGTTC GGTGGCCGAT CGCGCCGTGG TGCCGTCGTC GGGCATCCTC
CGCAACGGCA GTGCGTCGAT CCCGTTCGAC ACGACGGATC AAACGCTGCT CGGCGCGGTG
TCGGTCGGCG ATGCGACTAA CAAGACGTAT CGCCAGATCA CCAACGTCGC GGACGGCACC
GGCCAGCAGG ATGCGGTGAC GGTGCGCCAG TTGACCGGCG CGCTGCAGTC GTTCGCGGTC
ACCGGCCAGA AGTACTTCCA CGCGAATTCG ACGGCGGCCG ATTCGCTCGC GGTCGGCGCG
GAATCGGTCG CGGTCGGGCC AACGACGGTC GTCAACGGCG ACAACGGAGT GGGTATCGGC
AACGGCGCGA TCGTCGACCA GACCGCGCCG GGCGGGATCG CGATCGGCCA GGCGGCGAGT
TCCGCGCAGT CCGACGCGAT CGCGCTGGGT AGCGGCGCGA CGGCGACCGG CGCGCAGTCG
GTCGCGCAAG GCGCGAATGC GGTGGCGGTC AGTGTCGGCA GCGTCGCGCT CGGCTCGGGG
GCGCGCAGCA CGGCGACCGA TGCGCTCGCG CTCGGTGCCG GTGCGTCGGC GACTTTCGCG
AACAGCGTCG CGCTCGGCGC CGGTTCGCTG ACCACGGTCG GCGCACTGAC GAACTACGTC
GCGTACGGGT TGAGCAGCCC GCAGTCGTCG GCTGGCGAAA TCAACATCGG CAACCGCCAG
ATCACCGGGC TCGCGGCCGG CAAGAACGGC ACCGACGCGG TGAACGTGTC GCAGCTCGAT
TCGGTCGCGA GCCAGTTGAC GACGTTGATC GACCAGCGCA CGGCCAACCT CGGCGGGCAG
TACACGACGA ACCCGAACGG CGCGAACGTG CCGCCGGGCG CGAGCGGTTC GAATTCGTCG
GCGGGCGGCT CGGGGGCGGT TGCATCGGGC TCGAACAGCA CGGCGGTCGG CAACAATGCG
CTCGCATCGG GCAACGGCTC TTCCGCGATC GGCGTGGGCG CCACGGCAGC GGGCAACAAC
TCGACCGCGA TCGGCACGGG CAGCAACGAC GGCGGCCGCT CGAACGTGGT CGCGGTTGGC
TCGGCGGATT CGGCGCGCCA GGTCGTGAAC GTCGCGGCCG GTACGCAGGG CACCGACGCG
GTGAACGTGA ACCAGCTGAA CGCGGTATCG AACCAGTTCA CGCAGTCGCT GAACACGGTC
AACAACCAGC TCACGCAGAT GCAGCAGCAG ATCCAGCAGA CCGATTCGAT GGCCCGCGAG
GGGATCGCCG CGACCGCCGC GATGGCGTCG ATTCCGCACA TGGACCGCGA TTCGAACTTC
GCGATGGGGG TCGGCACGGC GACGTTCCAG GGCCAGAAGG CCATGGCGGT CGGCGTGCAG
GCGCGCGTCA CGGAGAACCT GAAGGCGACG CTGAACGGCG GTTTCGCCGG CAGCCAGCGC
GTCGTCGGCG CGGGCATGCT GTATCAGTGG AAGTGA
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| Protein sequence | MNKSFKSIWN EALGAWVAAS ELDRARGKRV ASSTRAPECA AHGEAATHAD IPSAPSVLKL
AVLTATACLG LFHASAHAQY AQDGGTASGG TTAISIGLGS TAAQQNSTAV GNLSTAQGLS
ATALGPGAHA MGDGSTSVGI NSQATGVNSS ALGVQAIGSG DYSVAIGNLS SATQSGAVAM
GSGAAATGVS AVGLGNNALA SGQYAAAMGL GASAAGAQSV SLGYASHATN TGSVALGNQS
TSSGAAGVAV GSGALTTGNS GVAMGVNSGA KGTASIAIGW GGTAGVPGSG TQSLGTSSIA
MGSNTNAGAD QALAFGLNAN ASGVSSIAMG VQSTATQQFA TALGNLSLAT GVSSSALGPG
ATASATNATA VGINSVAAAT STVAIGDSNS VAAAAGAGSV AGGYGSKVLG GIGAVALGYG
QTVSGNGAVA IGDPSTAIGT GAVTMGSNNT ANGDGAVAIG NTNNAQGTGS LALGNTSTAA
AAGAVAFGAS AVANNANDVA LGSGSTTAAP NPTASAVIGG VTYNFNGINP ASVVSVGNVG
AERQITNVAA GRISSSSTDA INGSQLAATN TALDSLSTST ASSITSLSTG VSSLSTGLSS
TNSAVTSLST STSTGISSLS TGLSSTNSAV TSLSTSTSTG ISSLSTGLSS TDSTVTSLST
STSTGLSSAN SSIASLSTST STGIGSLSTG LSSTDSTVTS LSTSTSTGLS SVNSSITSLS
TSTSTGIGSL STGLSSTNSA VTSLSTSTST VVGSLSTGLS STNSSVTSLS TSTSTGISSL
STGLSSTNSS VTSLSTSTST VVGSLSTGLS STNSNLTSLS TSTSTVVGSL STGLSSTNSS
ITSLSTSTST VVGSLSTGLS STNSNLTSLS TATSTGISSL STGLSSIANN NTNLGNSTAG
AIGGGATYDP TTGTISSPSY VTYNSDGSTT INNNVGSAID NINANGIKYF HANSTAPDSQ
ALGLDSVAIG PNAISRVDGS IALGSGSVAD RAVVPSSGIL RNGSASIPFD TTDQTLLGAV
SVGDATNKTY RQITNVADGT GQQDAVTVRQ LTGALQSFAV TGQKYFHANS TAADSLAVGA
ESVAVGPTTV VNGDNGVGIG NGAIVDQTAP GGIAIGQAAS SAQSDAIALG SGATATGAQS
VAQGANAVAV SVGSVALGSG ARSTATDALA LGAGASATFA NSVALGAGSL TTVGALTNYV
AYGLSSPQSS AGEINIGNRQ ITGLAAGKNG TDAVNVSQLD SVASQLTTLI DQRTANLGGQ
YTTNPNGANV PPGASGSNSS AGGSGAVASG SNSTAVGNNA LASGNGSSAI GVGATAAGNN
STAIGTGSND GGRSNVVAVG SADSARQVVN VAAGTQGTDA VNVNQLNAVS NQFTQSLNTV
NNQLTQMQQQ IQQTDSMARE GIAATAAMAS IPHMDRDSNF AMGVGTATFQ GQKAMAVGVQ
ARVTENLKAT LNGGFAGSQR VVGAGMLYQW K
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