| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5828 |
|---|
| Symbol | |
|---|
| ID | 4452574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2956488 |
|---|
| End bp | 2957972 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639697889 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_839454 |
|---|
| Protein GI | 116693921 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATG CACACGGCGC AATGGCGCTC GGGCAGGGAG CACAGGCAGG GCAGGCGACG
CGACCGGCAT CGGGCGGGGT CGGCGCGGCG GCGGCGATGC AGGCGGCGGG CGCCGCGGCG
GCCGGGCCGC TCGCGCGCTG GGGCGAGGAA ATGCGCGCCG ATGCCGCGTT GCGGAAGTAT
CGTCCGATCG GCGGCTGGAT CGACGCGCCC GAGCGCGCGC AACCTGAGCT TGAAGGCGAC
GTGCAGGCGG ACGTGATCAT CGTCGGCGCG GGCTTCGCCG GCCTGTCCAC GGCGCTGGAA
CTGGCGGCGC GCGGCGCGAG CGTCGTCGTG CTCGAACGCG AGTTCGCGGG CTTCGGCGCG
AGCGGACGCA ACGCCGGCTA TCTCGCCGGC GGCCAGGGCC TCGAATACGA GCTGTTTCTC
AAGCGGGTCG GCCACGAGCA GGCCAGGCGG ATCGTCGGCT TCTACGACGA AGGCGTCGCG
TACGTCGAAC GCAAGCTCGT CGAATACGCG ATCGACTGCG ACTACCACGC GTCGGGCATC
ATTCGCGCGG GCGTGCATCC GTCGCAGGAG AAGCGCCTGC GCGAAAGCAT GGCCACCGGC
ATCGAACTCG GCTCGCCCGC GCAGTTTCTC GATGGTGCAG CGATGCGCGA ACGCGGCATT
CCGCCGGCCT TCCTGTTCGG CGCATACGTG CCGGGTGGCG GCACGCTCGA TCCGGGCAAG
TACGTGGCGG GCTTGCGGCG AGCGGCGCTC GCGGCTGGCG TGAAACTCTA CGAGAACACC
GCGCTGCTCG ACTTCGACGC GGGCGAGACG GTGCGTGTGC GCACCGCCCG CGGCAGCGCG
AGCGCGCCGG TGCTGGTGCT CGCGACCAAT GCGTACACGC CGCAACTCGG CCTGCTCGGC
GACAAGGTGA TGCCGCTGCG CGTGTCGGCG CTCGAAACCG AGCCGCTGTC CGATGCGCAG
CTCGCGGCAC TCGGCTGGCC GAATCGCGAG GGCATCGTCA CGTCGCACCT GACGATGGAA
AGCCACCGCC TGACCGCGCG CAACACGCTG CTGCTGACCA CCAAGCGGCT GCATTACGTG
TACGGCTCGC AGACGCCGAA CGTGCCGGAC GACGACGCGT ATCGCGCGCT GCTGAAGACG
CTGCACGCGC GTTTTCCGCA ACTCGGCGAC GTGCCGGTGC GCGCATGCTG GAGCGGCTAC
ATCTCGTTCG CGGGCGATGC GTTGCCGGTG GTCGGCGCGG CCGGCGCGCA CGGCAACGTG
TTCTACACGG CCGGGTGTTC GGGGCATGGC GTCGGCACGC AATCGCTGAT CGGGCGCGTG
CTGGCAGAAC GCATTCACGA TGGACGATCG CCGCTGCTCG ACGCGTTGAC GCACAAGACG
CCGTCGGTGC CGCCCGAGCC GCTGCGATGG TGTGCGATGA CCGCGATGCT CGGCGTCGCG
AACCTGCTCG ACGAACGCGT GAACCGCAAG GTGCGGCCGG CGTAG
|
|---|
| Protein sequence | MGDAHGAMAL GQGAQAGQAT RPASGGVGAA AAMQAAGAAA AGPLARWGEE MRADAALRKY
RPIGGWIDAP ERAQPELEGD VQADVIIVGA GFAGLSTALE LAARGASVVV LEREFAGFGA
SGRNAGYLAG GQGLEYELFL KRVGHEQARR IVGFYDEGVA YVERKLVEYA IDCDYHASGI
IRAGVHPSQE KRLRESMATG IELGSPAQFL DGAAMRERGI PPAFLFGAYV PGGGTLDPGK
YVAGLRRAAL AAGVKLYENT ALLDFDAGET VRVRTARGSA SAPVLVLATN AYTPQLGLLG
DKVMPLRVSA LETEPLSDAQ LAALGWPNRE GIVTSHLTME SHRLTARNTL LLTTKRLHYV
YGSQTPNVPD DDAYRALLKT LHARFPQLGD VPVRACWSGY ISFAGDALPV VGAAGAHGNV
FYTAGCSGHG VGTQSLIGRV LAERIHDGRS PLLDALTHKT PSVPPEPLRW CAMTAMLGVA
NLLDERVNRK VRPA
|
|---|
| |