Gene Bcen2424_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5685 
Symbol 
ID4452356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2807315 
End bp2807941 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID639697746 
ProductCheC, inhibitor of MCP methylation 
Protein accessionYP_839311 
Protein GI116693778 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.74554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00173669 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGAAT CGGTGTTCAC GGCGGAGCAA CGCGACGCGT TGCAGGAAAT CGCCAACCTT 
GCAATGGGCC GCGCCGCCGC GCGGCTTGCG TTGTTGCTCG GGCATTTCAT CGAGCTGTCG
GTGCCGCGCG TGCGCGTCGT GAAAGCGGCC GACGCGGGCG ACGCGCTGCG CGAGATGACG
GGCATCCACG ACAACGTGAC TGCCGTGCGC CAGGGCTTCC GTTCCGACAT CAAGGGCGAG
GCGATCGTGC TGTGCCGCAC GGCGGGTGTC GCGCGGCTCA TGTCGGTCGT CGACCGTACC
TTCGGCGACG GCGTGTACGG CGGGATGGCG ACGCCGGACG AGATCGTGTT CGACGTCGCG
AACGTGCTGA TGGGCGCCTG CGTCGCGTCG ATCCTCGACG AACTCGGCCG CAAGCCCGTG
TTCTTTCCGC CGGGGCTGCT CGGTGCGAAC GTGTCGTTCG ACGACGTCTT CCAGCCGAAC
GAACTGGGGT GGAGCGTCGC GCTGCTGCTC GAGGTGAACT TCGGGCTCGA GGACCATACG
TTCCGCGCAC ATTTCGTGAT GCTGATGGCC GAGGATTCGA TCCGCCTGAT GGGCGACGCG
CTCGACGCGT TGCTGTCCGC GCTATGA
 
Protein sequence
MPESVFTAEQ RDALQEIANL AMGRAAARLA LLLGHFIELS VPRVRVVKAA DAGDALREMT 
GIHDNVTAVR QGFRSDIKGE AIVLCRTAGV ARLMSVVDRT FGDGVYGGMA TPDEIVFDVA
NVLMGACVAS ILDELGRKPV FFPPGLLGAN VSFDDVFQPN ELGWSVALLL EVNFGLEDHT
FRAHFVMLMA EDSIRLMGDA LDALLSAL