| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5485 |
|---|
| Symbol | |
|---|
| ID | 4451652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2580966 |
|---|
| End bp | 2581796 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639697546 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_839111 |
|---|
| Protein GI | 116693578 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGT CCTTACCCGA GCGCGGCGTG CTGCGCCGCT TCGGCGCGCT GCCCGCGGTG
GCCTTGCTCG CGGTGTGCTT CGTGCTGCCG CTGGCCGCGC TGGTCGATGT GGCATGCGCG
GGCGGCGGCC GCGCGTTCGC GGCGGTGTGG CGCGATCCGC TCGTCGCGGA TGCGATCGCG
CGCTCGCTGG CGCTGGCGGT GGGCGCCGGC ACGCTGTCGG TCGCCGTCGG CGTGCCGGTC
GCATTCGCGC TCGCCGGACA GTCGCCGGCC CGTCGCCACT GGTCGCTCGC GCTGCTCGGC
GTGCCGCTGG CGTTTTCCGG GCTGGTGATC GCGTACGGGT TCATCCTCGC ATTCGGCCGC
GCGGGCTTCG TGACCACGCT GCTGGCCGCG CTGGGCGCCG ATCCGACCGT GGTCGGCGGC
GCGATCTATA CGATGCCGGG GCTCGCGGTC GCCTATGCGT ACTACCTGAT CCCGCGCGTC
GCGCTGATGA TCTATCCCAC GCTCGCGAAT CTCGACCGGC GGCCGCTCGA AGCGGCGCTG
ACGCTCGGCG CGCGACCGTG GCGCGCATGG CTCGACGTCG CGTGGCGCGA ACTGTGGCCG
TCGGTCGCAT CCGCATGGTG CCTCGTGACC GCGATCGCGC TCGGCACGTA CGGCACGGCG
CTCGCGCTGG CCGGTACGCA GATCAACATC CTGCCGCTGC TGATGTATTT GAAGCTGTCG
GACGGGCAAA CCGATTTCTC GCAGGCGGCC GTGCTGTCGA TCGTGCTGAC GGCCATCTGT
ACCTGCGTTT TGGCACTAGG GGAAGGTCTT GTTCGCCAAC GACGTCATTG A
|
|---|
| Protein sequence | MQASLPERGV LRRFGALPAV ALLAVCFVLP LAALVDVACA GGGRAFAAVW RDPLVADAIA
RSLALAVGAG TLSVAVGVPV AFALAGQSPA RRHWSLALLG VPLAFSGLVI AYGFILAFGR
AGFVTTLLAA LGADPTVVGG AIYTMPGLAV AYAYYLIPRV ALMIYPTLAN LDRRPLEAAL
TLGARPWRAW LDVAWRELWP SVASAWCLVT AIALGTYGTA LALAGTQINI LPLLMYLKLS
DGQTDFSQAA VLSIVLTAIC TCVLALGEGL VRQRRH
|
|---|
| |