Gene Bcen2424_5414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5414 
Symbol 
ID4451451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2513709 
End bp2514653 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID639697475 
Productcyclase family protein 
Protein accessionYP_839040 
Protein GI116693507 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00312327 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAGCAA CGCTCGCCCG GCTCGCGCTC GCCGCGATTT TGCCGCTCGC GGCAGCCCAG 
GCGGCGCACG CCGCGCCGGC CGCCCCGGCG GCCGACTGGT ATCCGTCCGT GTATGGCGCC
GATGACGAAA TCGGCGCGGC CAACCTGCTG ACGCCCGACG TCATCAAGCA GGCGGTCGGC
CTCGTGAAGG CCGGCAAGAC CTATCCGCTG GCCGTGCCGG TGGACAAGCA CCTGCCGGCG
TTCCGCCATC GCAGCTTCCG GCTGTACAAC GTGCAGGTCG GCCAGCAGGC CGGCAAGAGC
CTCGGCCCGA ACAAGTTCAC GTTCAACGAC GAACTCGTCA ACGCATGGAC CGGCGTCGGC
ACGCAGTTGA ACGGCATCGG CCACATCGGC ATCGACAACG TGTACTACAA CGGCAACCGC
GCGGCCGATT TCGTGACCGT CGACGGCGTG AAGAAGCTCG GCGTCGAGAA GGTGCCGCCG
ATCGTCACGC GCGGCGTCGT GCTCGACATG ACCGCCTACT ACGGCAAGCC GATCGTGCCG
GGCGGCACCG AATTCACGGT CACCGACATC CAGGCCGTGC TGAAGAAGCA GGAGCTGACG
CTGCGCAAGG GCGACGTCGT GCTGTTCAAC ACCGGCTGGC TCGAGCTGAT CGGCAAGGAC
GACAAGCAGT TCCTCGACGT CGAGCCGGGC ATCGGCATGG AAGCCGCGAA GTGGCTGGCC
GACCAGGGGA TCGTCGCGTT CGGCGGCGAC ACGTGGGCGT CGGAGGTCTA TCCGAATCCG
CACACGCAGG ACGAATTCCC GGTCAACCAG TACATGCTCG CGAAGCGCGG CATCTACAAC
CTGGAGCTGA TCGACAGCCG TGCGCTGGTG CGCGACAAGG CATGGGAATT CCTGTTCGTG
CTCGGCCAGC CGCTGTACGT CGGCTCGACG CAGGTCATCC GCTGA
 
Protein sequence
MKATLARLAL AAILPLAAAQ AAHAAPAAPA ADWYPSVYGA DDEIGAANLL TPDVIKQAVG 
LVKAGKTYPL AVPVDKHLPA FRHRSFRLYN VQVGQQAGKS LGPNKFTFND ELVNAWTGVG
TQLNGIGHIG IDNVYYNGNR AADFVTVDGV KKLGVEKVPP IVTRGVVLDM TAYYGKPIVP
GGTEFTVTDI QAVLKKQELT LRKGDVVLFN TGWLELIGKD DKQFLDVEPG IGMEAAKWLA
DQGIVAFGGD TWASEVYPNP HTQDEFPVNQ YMLAKRGIYN LELIDSRALV RDKAWEFLFV
LGQPLYVGST QVIR