Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4844 |
Symbol | |
ID | 4451316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1845733 |
End bp | 1846764 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696900 |
Product | type III secretion exporter |
Protein accession | YP_838471 |
Protein GI | 116692938 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000249034 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.515016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA AGGACCAGAA GCCGACCGCG AAGCGCCTGC GCGAGGCGCG CGAGAAAGGC GACGTGCCGA AGAGCGCGGA AACGGTATCG TCCGCGTTCT TCGTCGGCGT GTGCGTGGCG CTCGCGGTGG GCATCGGCTC GCTGTTCGCG CGGGTGCAGG CGCTGTTCCG GCTCGTGTTC GACGCGGTCG GCGCGGCCGA TCCGTCCGCG CGGCTCGCGG CGCTGATCGA CGGCGCCGCG CGCGACTGGG CGACGCTGTC CGCGCAGATC GTCGCGGCCG GCCTGCTGGC GGGGCTGCTC GCGGGCTTCG TGCAGGTGGG CGGCGTGATG GCGTGGAGCC GCCTCGTGCC GCAGTTGTCG CGGCTCAACC CGGCCGAGGG GATGAAGAAC CTGTGGTCGC TGCGCAACCT CGTCAATCTC GCGAAGATGC TGCTGAAGAC GGCGCTGCTC GTCGCGACGC TTGGCTGGCT GATCGTCGAG TCGCTCGATC CGTCGGTGCA GTCGGGCTTC ACGCGGCCGG CCTCGATCCT CGCGCTGATC GTGAAGCTGC TGATGCTGCT GTTCGGCTGG GCCGCGCTGA TCTACATCGT GATGGCGCTG ATCGACATCG TGCACCAGCG GCACGAGTTC AACCAGAAGA TGAAGATGTC GATCGACGAA GTGCGGCGCG AGCACAAGGA GGACGAAGGC GATCCGCACA TCCAGGCGAA GCGCCGCCAG CTCGCGCGCG AAGCGCAGTT CGCGTCGCTG CCCGACCGGA TCGGCTATGC GTCGGTGGTC GTCTATTCGC CGCGCGTGGC CGTCGCGCTC TACTACGGCG GGATGGGCTC GCTGCCGTGG GTGCTCGCGC GCGGCGAGGG CGACGCGGGC GAGCGGATCG TGCGGCTGGC CCGCGACGCG CTGCGCCCGA CGCTCGCCAA CGTCGGGCTC GCGCAGGCGC TGTACGAGAC GACGCCCGAG AACGGCACGA TCCAGCCGCA GCATTTCCGC GCGGTCGCGC AGTTGCTGAA ATGGGCGACC GGCGCCGCTT GA
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Protein sequence | MAEKDQKPTA KRLREAREKG DVPKSAETVS SAFFVGVCVA LAVGIGSLFA RVQALFRLVF DAVGAADPSA RLAALIDGAA RDWATLSAQI VAAGLLAGLL AGFVQVGGVM AWSRLVPQLS RLNPAEGMKN LWSLRNLVNL AKMLLKTALL VATLGWLIVE SLDPSVQSGF TRPASILALI VKLLMLLFGW AALIYIVMAL IDIVHQRHEF NQKMKMSIDE VRREHKEDEG DPHIQAKRRQ LAREAQFASL PDRIGYASVV VYSPRVAVAL YYGGMGSLPW VLARGEGDAG ERIVRLARDA LRPTLANVGL AQALYETTPE NGTIQPQHFR AVAQLLKWAT GAA
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