| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4618 |
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| Symbol | |
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| ID | 4451867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1595146 |
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| End bp | 1596351 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639696674 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_838245 |
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| Protein GI | 116692712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.343268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.223248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG AGATCGATAT TAAGTCGCCG AAACGGCTGC CCAACCTCAA GCTCGTCGCC
ACGATCACCG CGCTGATCGC GGTCGGCATC GTGGCGACCG GCATCGTCGG CCGCGCGCAC
GCGAAACAGG AAATGGCGAC CTGGTCCGCC GAACAAGCGG TGCCGACCGT GGTCGCGTAC
ACGCCGTCGA CCGGCGGCGA CGGCGCGACG CTCGTGCTGC CCGGCCACCT GTCCGCATTC
GAGAGCGCGC CGATCCACGC GCAGGTGTCG GGCTACCTGC ATGCGTGGTA CACCGACATC
GGCGCGCACG TGAAGTCGGG GCAACTGCTC GGGCTGATCG ATACGCCCGA GCTCGACCAG
CAACTGCAGC AGGCGCGCGC CGACCTGCAG AGCTCGCTCG CCAACGAGAA GCTCGCCGCG
TCCACGGCCG CGCGCTGGAC CCGGATGCTC GCGCAGGATT CGGTGTCGCA GCAGGAAACC
GACGAGAAGA CCAGCGACCT CGCGGCCAAG CAGGCGATCG TCGCGGCCAA CGAGGCCAAC
GTGCGACGCC TCGACGCGCT CGAGGCGTTC AAGCGCATCG TCGCGCCGTT CGACGGCGTC
GTCACCGCGC GCAAGACCGA CATCGGCCAG TTGATCTCGG CCGGCGGCGG CGCCGGCCCG
GAATTGTTTG CGGTGTCCGA CGTCCACCGG ATGCGCGTCT ACGTGAGCGT GCCGCAGAAC
GAGGCCGCCG CGATCCGGCC CGGCATGACG GCCACGCTGA CCGTGCCGGA GCATCCGGGC
GAGACCTTCC GTGCGACGCT CGCCGACACC GACGACTCGA TCGCCGACTC GACCGGCACG
CTGCTCGTGC AGTTGATGGT CGACAACTCC GCAGGCAAGC TGATTCCCGG CGAATACACC
GAGGTGCATT TCGCGCTGCC GGCCGGCAGC ACCCACGCGC TGACGATTCC GGCCAGCTCG
TTGATCTTCC GGCAGGCCGG CCTGCAGGTC GCCGTGGTCG GCAAGGACGA TCGCGCGATC
TTCAAGCCTG TGACGATCGC GACCGATCTC GGCACGCACG TACAGATCGC GACCGGCCTC
GCGCCGGACG ACCGCGTGAT CGACAATCCG CCCGATTCGC TCGCCGATGG CGACCCGGTC
AGGCTCGCGG CGCCGGCCCG CACCGTCGCA TCGGTCGCGC GCGATACGGA GCGTGCGCAT
GGCTAA
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| Protein sequence | MSTEIDIKSP KRLPNLKLVA TITALIAVGI VATGIVGRAH AKQEMATWSA EQAVPTVVAY
TPSTGGDGAT LVLPGHLSAF ESAPIHAQVS GYLHAWYTDI GAHVKSGQLL GLIDTPELDQ
QLQQARADLQ SSLANEKLAA STAARWTRML AQDSVSQQET DEKTSDLAAK QAIVAANEAN
VRRLDALEAF KRIVAPFDGV VTARKTDIGQ LISAGGGAGP ELFAVSDVHR MRVYVSVPQN
EAAAIRPGMT ATLTVPEHPG ETFRATLADT DDSIADSTGT LLVQLMVDNS AGKLIPGEYT
EVHFALPAGS THALTIPASS LIFRQAGLQV AVVGKDDRAI FKPVTIATDL GTHVQIATGL
APDDRVIDNP PDSLADGDPV RLAAPARTVA SVARDTERAH G
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