Gene Bcen2424_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4600 
Symbol 
ID4453839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1572650 
End bp1573519 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID639696656 
Productpeptidase M23B 
Protein accessionYP_838227 
Protein GI116692694 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.204329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC GCGAGATTCA CCCTAAGGCG GCGTGGCTGT CGGGCCTGGC CGCCGTGCTC 
GTCATGGCCG GTTGTGCAAG TACGCAGTCC GTTCCGCCGA GCGACACGCT GGCGGGAAAA
CCCGCTGATA CGAGCCCGCC TGCCGCGCAG TTGGCCGCGC CGATGCCGGC CGCACCGATT
CTCGTCGCGC AAAAGTACGT CGTGAAACGC GGTGACACGC TGACTGGCAT CGCCTCCGCG
AACGATTGCA GCGTGGCCGA CTTGCGCACC TGGAACAAGC TGGCCGCGAA CGGCAGGCTG
CGCATGGGGC AGGTACTGCG CATCGTCAAG CAGCAGCCGC TGCCGCCCGC GGGCGCGGCC
GGCACGCAGA TTGTCGCGAG TAATGGCGCG GCGAGTAGTC AGGGCAACTC GCAGACCACC
GCGCAGGCCA CTTCGCAGGC CGGCGCATCG ACCGCGAGCG ATCGCCAGGT CGTCAAGGAA
ACGAAGCGCC ATGCGGGCGG CGTCGCGCTC AAGTGGCCGG CAACCGGCAA GATCGTCGAC
GGGTTCAAGC CCGGACAGAA CCGCGGCATC CAGATCGCCG GCCGGCCGGG CGACCCGGTG
CGCGCCGCGG CCGACGGCCG CGTGATGTAC GCAGGCACCG GCCTGAACGA TTACGGCAGC
CTGATCATCG TCCAGCACAA CGCGGACTTC CTGACCGCCT ATGCGCACAA CCGCAAGCTG
CTCGTGAAGA CGGGCGACAT CGTGCATCAG GGCGATGCGA TCGCCGAGAT GGGCGACCTC
GACAACTCGC GCGTCGCGCT GCTGTTCGAG GTGCGACGCG ACGGCAAGCC GGTGAATCCG
ATGCCGTACC TGCCTTCGTC GCAAGGGTGA
 
Protein sequence
MKTREIHPKA AWLSGLAAVL VMAGCASTQS VPPSDTLAGK PADTSPPAAQ LAAPMPAAPI 
LVAQKYVVKR GDTLTGIASA NDCSVADLRT WNKLAANGRL RMGQVLRIVK QQPLPPAGAA
GTQIVASNGA ASSQGNSQTT AQATSQAGAS TASDRQVVKE TKRHAGGVAL KWPATGKIVD
GFKPGQNRGI QIAGRPGDPV RAAADGRVMY AGTGLNDYGS LIIVQHNADF LTAYAHNRKL
LVKTGDIVHQ GDAIAEMGDL DNSRVALLFE VRRDGKPVNP MPYLPSSQG