Gene Bcen2424_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4341 
Symbol 
ID4452700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1285365 
End bp1286120 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID639696397 
ProductABC transporter related 
Protein accessionYP_837968 
Protein GI116692435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.303268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGA TCGATTCCAT CCATAAACGG TTTCAGCAGC ACGCGGTGCT GAAGGGCGTG 
AGCCTCGACG TACAGCAAGG TGAAGTCGTG TGCCTGATCG GGCCGTCCGG TTCCGGCAAG
TCGACCGTGC TGCGCTGTAT CAACGGCTTC GAGACCTACG ACGAAGGGTC GATCACGATC
GACGGCGTGA AGGTCGACGC GCATTCGAAG CGGATTCACG AATTGCGGAT GCGGGTCGGC
ATGGTGTTCC AGCGCTTCAA CCTGTTTGCC CACCGCACGG CGCTCGAGAA CGTGATGGAA
GGGCCGGTGC ACGTGCGGCG CGTGCCGGCC GCGCAGGCGC GCGAACAGGC CCGCGCGCTG
CTCGACAAGG TCGGCCTCGC GCACCGGATG AATGCGTATC CGTCCGAGCT GTCGGGCGGG
CAGCAGCAGC GCGTCGCGAT CGCACGTGCG CTTGCGATGG AGCCGCAGGC GATCCTGTTC
GACGAGCCGA CGTCGGCGCT CGACCCCGAA CTCGTCGGCG AAGTGCTGGG CGTGATGCGC
GGGCTGGCCC GCGACGGGAT GACCATGGTG GTCGTCACGC ACGAAATGGC ATTCGCCCGC
GAGGTGGCCG ATCGCGTGTG CTTCCTGCAC GACGGCACGA TCTGCGAAAG CGGGCCGGCA
CGCGCGGTGC TGACGCAGCC GAGCCATCCC CGCACGCAGG AATTCCTGCG TCGCCTGCTG
GCGTCGGACG GCGCCGACCA CCCGGATCGA ACATGA
 
Protein sequence
MIRIDSIHKR FQQHAVLKGV SLDVQQGEVV CLIGPSGSGK STVLRCINGF ETYDEGSITI 
DGVKVDAHSK RIHELRMRVG MVFQRFNLFA HRTALENVME GPVHVRRVPA AQAREQARAL
LDKVGLAHRM NAYPSELSGG QQQRVAIARA LAMEPQAILF DEPTSALDPE LVGEVLGVMR
GLARDGMTMV VVTHEMAFAR EVADRVCFLH DGTICESGPA RAVLTQPSHP RTQEFLRRLL
ASDGADHPDR T