Gene Bcen2424_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4332 
Symbol 
ID4452691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1277495 
End bp1278823 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content69% 
IMG OID639696388 
Productmajor facilitator transporter 
Protein accessionYP_837959 
Protein GI116692426 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTC ATCACGCTCA GGCATTGTCT TCCGCCGCCG GCGACGCGAA CGCGTCGCTG 
AACCGGCTGC TGTTCCGCAA ACTCATGCCG CTGCTGATCG CCGCCTATGT GATCAGCTTT
CTCGACCGCA CCAACATCGC GTTCGCCAAA CATTCGATGG GCATCGATCT CGGCATCTCA
TCGGCCGCGT ACGGGCTCGG CGCGGGGCTG TTCTTTCTCA CCTACGCGTT GTTCGAGATC
CCGAGCAACC TGATCATGCA TCGCGTCGGC GCGCGCTTCT GGATCACGCG GATCATGATC
ACGTGGGGCG CGCTGTCGGT CGCGATGGCG TTCGTCCGCG GCGAGACGTC GTTCTACGTG
ATGCGCCTGC TGCTCGGCGT GGCCGAAGCC GGCCTGTTTC CCGGCGTGAT GCTGTATCTG
ACGTACTGGT TCGGCCGCGA GGAACGTGCG CGCGCCACCG GCTATTTCCT GCTCGGCGTG
TGCATCGCCA ACATCGTCGG CGGGCCGCTC GCCGGCGCGC TGATCGAGCT CGACGGCACG
CTCGGCTTCC ACGGCTGGCA ATGGCTGTTC GTCGTCGAAG GCATCCCGGC GATCCTGCTC
GCGTTCGTCG TGTGGACGCG ATTGCCGGAC CGTCCGAGCG CCGCGCCGTG GCTCGCCCCG
GAAACCGGCC GCGCGCTCGA GCGCAAGCTG GCCGCCGAAC AGGACGCGGG CGTCGCCGCG
CACGGCGGCC ATGCGTTCGG CGCCGCACTG CGCGATCCGC AGATCTGGCT CGCGATCTTC
GTGTACTTCT GCCACCAGTT GACCATCTAC ACGGTGATCT TCTTCCTGCC GGGCATCATC
GGCGCGTCGG GGCGGCTCTC GCCGGTCGCG GTCGGGTTGC TGACGTCGCT GCCCTGGCTC
GCCGCCGCGC TGGGCGCCGG GACGCTGCCC CGCTTCGCCC GCGAGTCGCG TCATTCGCGC
CGGATGCTGT GCGCGGGGCT GATGGTCATG GCCGCCGGCA TGGTCGGCGC TGCGCATGCG
TCGCCGCTGG CGGGGCTGCT CTGCGTGTGC GTCGCTGCAT CGATGTTCTT CGTCGTGCAG
TCGATCGTGT TCACGTTTCC GGCGTCGCGG CTCGCCGGCA GCGCGCTGGC CGGCGGGCTC
GGGCTCGTGA ATACGTGCGG GTTGCTCGGC GGCTTCGTCG GGCCGACCGT CGTCGGCGCG
ATCGAACAGG CGACCGGCAA TGCGAAGAAC GGGCTGACGC TGCTGGCGGC CGCGCTCGTC
GTCGCGGCGT TCGCGAGCCT CGCGTTGCGG CACGGGCACG AGCACGCCGA CGTGCGGTCG
CGCGGCTGA
 
Protein sequence
MSTHHAQALS SAAGDANASL NRLLFRKLMP LLIAAYVISF LDRTNIAFAK HSMGIDLGIS 
SAAYGLGAGL FFLTYALFEI PSNLIMHRVG ARFWITRIMI TWGALSVAMA FVRGETSFYV
MRLLLGVAEA GLFPGVMLYL TYWFGREERA RATGYFLLGV CIANIVGGPL AGALIELDGT
LGFHGWQWLF VVEGIPAILL AFVVWTRLPD RPSAAPWLAP ETGRALERKL AAEQDAGVAA
HGGHAFGAAL RDPQIWLAIF VYFCHQLTIY TVIFFLPGII GASGRLSPVA VGLLTSLPWL
AAALGAGTLP RFARESRHSR RMLCAGLMVM AAGMVGAAHA SPLAGLLCVC VAASMFFVVQ
SIVFTFPASR LAGSALAGGL GLVNTCGLLG GFVGPTVVGA IEQATGNAKN GLTLLAAALV
VAAFASLALR HGHEHADVRS RG