Gene Bcen2424_4125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4125 
Symbol 
ID4452863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1032429 
End bp1033124 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID639696183 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_837754 
Protein GI116692221 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.484601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.461056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA GAAAAACCGC CACACGACCC GAGCCGCCCC CGCCACGCAC CTGGGATGCG 
CGGCTCGCGC GCTCGCTTGT CCGACCGCTC GTCGATACGC CGGTCACCCC GAATCACCTC
ACTACCCTTC GTCTGCTGAT CGGCCTCGCC GGCGCCTGGT GCCTCGCGCA CGGCGGTTTC
GGCTGGAGCA ATGCAGGCGC GTTCCTGATC GTGCTGTCGA ACTTCGTCGA CCACACCGAC
GGCGAGCTCG CGCGCATCAG CGGCAAGTCC AGCAAGATCG GTCATTTTTA CGACCTCGCG
GCGGATGCGC TCGTAACGGT CGCGCTGTTC GTCAGCATGG GCGTCGGCAT CGTCGCGCAG
GGCGGCCAGA TGGCCGCGTC GCCGGTGCTG CTCGGCGCGG TGGCCGGCGC GGCCGTCGCA
CTGATTTTCT TCCTGCGCAT GCGGATCGAG TCGATCGCCG GCAAGGCCGG CACCAAGCAG
GCGTTCGCCG GCGGCTTCGA GACCGAAGAC GTGCTGTACC TGCTGCCGAT CGTGACGCTC
GTGGACGGCG TCGAGCCGTT CCTGCTCGCG GCGTCGATCG GCGCCCCGCT GTTCGCCGCC
TGGGTCGTGA TCGACTGGTG GCGCATCGTG CGGCGCGGCA ACCTTCCGCA GAACCCGGCC
GCGCAGAACC CAACCGAAAT CCAGGCTTCC AAATGA
 
Protein sequence
MDQRKTATRP EPPPPRTWDA RLARSLVRPL VDTPVTPNHL TTLRLLIGLA GAWCLAHGGF 
GWSNAGAFLI VLSNFVDHTD GELARISGKS SKIGHFYDLA ADALVTVALF VSMGVGIVAQ
GGQMAASPVL LGAVAGAAVA LIFFLRMRIE SIAGKAGTKQ AFAGGFETED VLYLLPIVTL
VDGVEPFLLA ASIGAPLFAA WVVIDWWRIV RRGNLPQNPA AQNPTEIQAS K