Gene Bcen2424_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4083 
SymbolglnP 
ID4452917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp980680 
End bp981387 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID639696141 
Productglutamine ABC transporter permease protein 
Protein accessionYP_837712 
Protein GI116692179 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.292626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC CGGGTGGCCG CGCCGGTCTT GAATCGAACG GGGAGCGACA AGTGAATTTC 
GATTGGTCGG CGATCTGGGC GGCGTTGCCG GACCTGATGG ACGGGGTCCG GTTGACGGTG
TTCATCGCAT TACTGGGGCT GGTGGGCGGT TTCATCGTCG GGATGATCGC GGGCATGTTC
CGCGCATACG GACCGAAGGC GATGAACGTG CTCGCACAGG TCTATATTGA ATTGATCCGC
GGCACGCCGA TCGTCGTGCA GGTGATGTTC CTGTATTTCG CGCTGCCGCT GCTCGCGCAT
ATCCGCATCG ACGGCCTGAC GGCCGCGATC ATCGCGATCA CGGTGAATTC CGGCGCGTAT
CTCGCGGAAG TGGTGCGCGG CGCGCTGCTG TCGATCCCGA AGGGGCTGAC GGAGGCGGGG
CTCGCGATGG GCCTGTCGAT GCCGCGCGTG CTGCTGAAGA TCGTCGGGCC GCTGGCGTTC
CGGCGGCTGA TTCCGCCGCT CGGCAACCAG TGCATCGTGA GCCTGAAGGA CACGTCGCTG
TTCATCGTGA TCGGCGTGGG CGAACTGACG CGCAAGGGGC AGGAAATCAT CGCGGGCAAT
TTCCAGGCGG TCGAGATCTG GAGTGCGGTG GCCGTCATCT ATCTGATACT GACCGGCGCG
ATGACGCTGA CGCTGCGGAT CGTCGAGAAG AGGATGCGTA TCTTATGA
 
Protein sequence
MARPGGRAGL ESNGERQVNF DWSAIWAALP DLMDGVRLTV FIALLGLVGG FIVGMIAGMF 
RAYGPKAMNV LAQVYIELIR GTPIVVQVMF LYFALPLLAH IRIDGLTAAI IAITVNSGAY
LAEVVRGALL SIPKGLTEAG LAMGLSMPRV LLKIVGPLAF RRLIPPLGNQ CIVSLKDTSL
FIVIGVGELT RKGQEIIAGN FQAVEIWSAV AVIYLILTGA MTLTLRIVEK RMRIL