| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3586 |
|---|
| Symbol | |
|---|
| ID | 4451593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 432031 |
|---|
| End bp | 432795 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639695645 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_837218 |
|---|
| Protein GI | 116691685 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0486614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC AATCTTCCGT GCCTGATACG ACCATGACCG ACGCGCTGCT GAAACTCGAA
CATCTCGACA CGTTCTACGG ACCGGTGCAG GTGCACTTCG ACGTGAACTT CGAGGTCGGC
CGCGGGCAGA TCGTCAGCCT GCTCGGCGGT AACGCGAGCG GCAAATCGAC GACGATGAAG
CTGATTCTCG GGCTGATGCG GCCGAAGCGC GGCGTCGTGC GTTTCGACGG CGACGACGTG
ACGGCGCTCG CGACGCCGCA GCGCGTGCGG CGCGGGATCG CGGCCGTGCC CGAGGCGCGG
CGGCTGTTCG GCGACATGAG CGTGCGCGAG AATTTGCTGA TGGGCGCGTA CACGCGCGGC
GATCGTGCGG CGGTGAGCGA AGACTACGAA CGCGTGCTCG ACCTGTTTCC GCGTGTGCGC
GAACGGCTCG CGCAGCGCGC GGGCACGCTG TCGGGCGGCG AGCAGCAGAT GCTTGCGATG
GCGCGTGCGC TGATGGCGCG GCCGAAACTG ATCTGCATGG ACGAGCCGAC GATGGGGCTG
TCGCCGCTCT ACGTCGACAA GGTGCTCGAA CTGATCGACG CGATCAACAA GCAGGGCGTG
ACGGTGTTCA TGGTCGAGCA GAACGCGAGC CTCGCGCTGG AGATTGCACA CTACGGGTAC
GTGCTGCAGA CGGGGCGCGT CGTGCTCGAA GGGCCCGCGA AAACGCTGCT CGACGATGAG
CGCGTGCGCG ATGCGTATCT CGGCGGGGAG GCGGTGGCGG TGTAG
|
|---|
| Protein sequence | MTVQSSVPDT TMTDALLKLE HLDTFYGPVQ VHFDVNFEVG RGQIVSLLGG NASGKSTTMK
LILGLMRPKR GVVRFDGDDV TALATPQRVR RGIAAVPEAR RLFGDMSVRE NLLMGAYTRG
DRAAVSEDYE RVLDLFPRVR ERLAQRAGTL SGGEQQMLAM ARALMARPKL ICMDEPTMGL
SPLYVDKVLE LIDAINKQGV TVFMVEQNAS LALEIAHYGY VLQTGRVVLE GPAKTLLDDE
RVRDAYLGGE AVAV
|
|---|
| |