Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2409 |
Symbol | |
ID | 4448160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 2669886 |
End bp | 2670812 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639694474 |
Product | LysR family transcriptional regulator |
Protein accession | YP_836052 |
Protein GI | 116690429 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0488071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCATC CCGATCTGCG CCGCCTCGAC CTGAATCTGC TGCTCGTATT CGACGCGCTG TACCGCCATC GGTCTGTCGC GGCGGCCGCG CATGAGCTCG CGTTGAGCCC GTCGGCGTTG AGCCACGCGC TCGCCCGGCT GCGCGACGCG ATCGGCGATG CGCTGTTCGT GCGCCTCGGC AACGAGATGC AGCCGACCGT GCGCGCCGAC GACATCGCCA CCTGGGCCGG CGACGCGCTC GACGCGATGT CGAAAGGGCT CGCCCGCGCG CGCCGCTTCG ATCCCGCGCA AAGCGACCGC ACGTTCGTGT TCGCCGCGAC CGACTACACG GCGTTCGCGG TGCTGCCGGC GTTCCTCGCC CGCATCCAGC ACGTGGCGCC GCACCTGCGG GTCCGCGTCG TCCATTCGGA CCGCAAGATT TCCGTCGACG AACTCGCGGC CGGCCGCATC GACTTCGCGC TCGGCTACCA CGAGGAATCG GCGGCCGACG CGCCGGGCAT CGAGGATTTC GACTGGTTCT CCGACGACTA CGTCGTGATC GCGAGCGCCG CGCATCCGGA CATCCGGCGG CGGCTGACGC TCGACCAGTA CCTGGCGGCC CGCCACGTGG TCGTCACGCC ATGGAACGAG TCGCGCGGTG TCGTCGACTA CGTGCTCGAC CGGCTCGGTC TCGCGCGGCA TGTGGCCGTG CAGTTGCCGA CCGTGCTGGC CGCGCCGTTC GTGATCGCGG AGTCGGCACT CCTGATGACG GTGCCGAACC GCGCCGCGCA GGCGCTGCGG CATGCGGCGC CGATCCGCAT CTTCCCCGCG CCGTTCGAGA TCCCGCGCTA CACGGTGAAG GTCTACTCGC ACGCGAAGCA TGCGCGCACC GATGCGCACC GCTGGATTCG CGCCCAGTTA CTCGACGCAC GGCCGCCCCC AGACTAA
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Protein sequence | MMHPDLRRLD LNLLLVFDAL YRHRSVAAAA HELALSPSAL SHALARLRDA IGDALFVRLG NEMQPTVRAD DIATWAGDAL DAMSKGLARA RRFDPAQSDR TFVFAATDYT AFAVLPAFLA RIQHVAPHLR VRVVHSDRKI SVDELAAGRI DFALGYHEES AADAPGIEDF DWFSDDYVVI ASAAHPDIRR RLTLDQYLAA RHVVVTPWNE SRGVVDYVLD RLGLARHVAV QLPTVLAAPF VIAESALLMT VPNRAAQALR HAAPIRIFPA PFEIPRYTVK VYSHAKHART DAHRWIRAQL LDARPPPD
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