Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1705 |
Symbol | |
ID | 4449233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1891411 |
End bp | 1894131 |
Gene Length | 2721 bp |
Protein Length | 906 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639693750 |
Product | TonB-dependent receptor |
Protein accession | YP_835350 |
Protein GI | 116689727 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.278713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCAA CGGCTTTGGG ATCGGCAATA CGCAGCATCG TATGGGCTGA AGTCGCGTTG ACGGCGGCTT TGGGTACCTC CGCTTACGCG CAGACAACGC CTGTCGACGG GAGCGTCGCC GCCGAGCAAA CCGGCAGCAC GGCCGCCGCC GCGCCCGCGC CGGCATCGGG CACCGCCGCG GGCGGGCAGA CCGTGAAAAA GCTCGACAAG TTCGAAGTGA CGGGCTCGCT GATCCGTACA TCCGACAAGG TCGGTCACAC CGAGGTGCAG GTCATCACCG CGAAGGAAAT CCAGCAAAGC GGATACACGA CGGTTGCCGA TTTCCTGCGT TCGACCTCGG CCAATTCCGC AAGCAGCTGG GGCCAGACGA CGATGAACAG CTCGGCCCCC GGCGGCGCCG GCATGGCGTT GCGCGGGCTC AGCGAGAAAT ACACGCTCGT GCTCGTCGAT GGCCAGCGCG TCGCGAACTA TGCGCAGTCG GTGAACTTCA CCGACACATT CTTCGATGTC AACGCGATCC CGTTGAACAT GGTGGAGCGC GTCGAGATCG TCAAGACCGG CGCGGTATCC GTCTACGGCT CGGACGCGAT CGCGGGCGTC GTCAACATCA TTACGAAGAA GAACTTTCAG GGCCTGCAGA TCGACGGCCA ACTCGGCAAG GCGCAGCATC CGGGCGACGG GCAGGGCAAC TTCAGTGTAC TGGCCGGCTT CGGCGACCTG AATTCGGATC GCTTCAACGT CACCGCGGCC GCCAGCTATT ACCGCGATTC GGGCTCGACG CTCGGCGATC GCGACATGAC GTCGGCGCAA GACTTCACGC AATATCCCGG CGGGCTGGCA GCGCCGCTCG GGCCGAACCA GCAATCGTAC TGGTCGCTGG CGGACGGCTC CAGGGTGCCG CTCTCGCCGT GCCCGCCGGG CAGCAAGACG AGCGCGACCA ATTGCACGTA CAACCCGGCC GCGTCGACAT CGCTCGTTCC GTCCACGACG CGCCTGAACG CGAAGGTGCG CGCCACCTTC AAGATCGACG ACAACACGCA GGCCTATGCG GGCTTCTGGG TGAGCCGCGA TGAAACCGTC CAGTTGCAGG GACCGGCCTC GATCTCGAGC ACGACGAACG TCTACAACCC GTCGACCGGG TCCGTTTCGC CGCTGCCGCG CACCGTACCG GTGAGCAACC CCTATAACCC GTTCGGCGTG CCGACGGCGA TCAACCTGAC CTTCCCGGGC AACGTAGTAG GGGCGGACAC GGTATCGACG TTCTGGATGG CGAACACGGG CGTCAAAGGT TCGTTCGACA CGGGCAGATT CGGCGCGTGG GACTGGTCGG CCGATTACGG CCACTCGCAG AGCACCGTCG ATACGACGTA TCGCAACCGG ATCAACGTCG CGGGCCTCGA GAACATGCTC GCGAACGGCA CCTACAACTT CTCGAACCCG GCCGCCACGC CAAACGGCCT GAACGGCGTT TTCACGGACG ACGATCAGCA GGCCATCTCG AAGGTCGACA GCGTGACAGC CAAGGCCTCG ACGTCGAATC TCTTCACGCT GCCCGGGGGC CCGGTCGGCC TGGGCCTGGG CACCGAGTTC CGTCACGAAT CGTCGACGAT CAACCCGCAG ACGCTTGCGT CGCAGGGCGT ATCCGCACCC GCGAACGTGC AGACGGTGGA GGGTTCGCGC AACGTCGCCG CCGCGTTTTA CCAGGTCGAC ATTCCGATCC TGCGCAACCT GACGTTCACG CAGGCGGGCC GCTACGATCA CTACAGCGAC TTCGGCGGGG CGTTTTCGCC GAGCTTTGCG CTGCGTTTCC AGCCGGTGCA AATGCTGACG ACGTATGCAT CGTACAGTCG CGGCTTCCGC GCGCCGACCC TCGTCGAAAA CTCGCAGGCC GTCTATCTCT CTCACCAGAA CCTCGTCGAT CCGAACGATC CGAGCGGTGT GCCGACCAAG CACTTCACGA CGGAGCAAGT CGCGGGCAAT CCGAATCTTC AGCCCGAGCA CACGAAGAAC TACAACATCG GCTTCCAGCT TTCACCCGAT GCGATGACCG ATATCGGTGC GGCGTTCTAC AAGGTCCGCA TCGACGGCGT CATCGGTACC GACGATCCGA ACGCGGTGCT CGTCGCCAAC GATCCTTCCC GTGTCGTGCG CAACGCCGAC GGGTCGGTGC GTTACCTCGT TCAGCATTTC GTGAACCTAG GTGCGCTCGA CACTGATGGC TTCGATCTCA ATTTCCGCAA AGCGCTGCGT ACCAAGTACG GCACGTTCAC GCTCGCAGGC GACTGGACTT ATGTGTGGCA CTTCAAGCTG CACAGCCCCG GAACCGCACC GCAGGACTTC GCCGGCAACA ACCTTGCGCT GCTGCAGCCG TTCGGCGCGA GCAACCCGCG CTGGAAGGGC AATACGAGCG TGAGCTGGGA CTACCGGCAA CTGACCACCA CGCTGACCTG GCAATACACG GGGCCATATA CGAACGCCGT GGCCGCGGAA TTCGGCGACG GCGGTACGGG ATCGGTGGCG TCGTACAGCC AGTTCAACCT CATGTTCAAC TATCGCGGTT TCAAGCATTG GACGATTTAC GGCGGCATCA CGAACCTCTT CGACAAGAAG CCGCCGTTCG ACGTCGAGTG GCAAGCCGTG CCCGACATCA CTGGCTATGA CCAGTCGCTC TACACGAACC TTGGTCGTTT CTTCCAGGTC GGGGCGACGT ACCGGTTCTG A
|
Protein sequence | MKPTALGSAI RSIVWAEVAL TAALGTSAYA QTTPVDGSVA AEQTGSTAAA APAPASGTAA GGQTVKKLDK FEVTGSLIRT SDKVGHTEVQ VITAKEIQQS GYTTVADFLR STSANSASSW GQTTMNSSAP GGAGMALRGL SEKYTLVLVD GQRVANYAQS VNFTDTFFDV NAIPLNMVER VEIVKTGAVS VYGSDAIAGV VNIITKKNFQ GLQIDGQLGK AQHPGDGQGN FSVLAGFGDL NSDRFNVTAA ASYYRDSGST LGDRDMTSAQ DFTQYPGGLA APLGPNQQSY WSLADGSRVP LSPCPPGSKT SATNCTYNPA ASTSLVPSTT RLNAKVRATF KIDDNTQAYA GFWVSRDETV QLQGPASISS TTNVYNPSTG SVSPLPRTVP VSNPYNPFGV PTAINLTFPG NVVGADTVST FWMANTGVKG SFDTGRFGAW DWSADYGHSQ STVDTTYRNR INVAGLENML ANGTYNFSNP AATPNGLNGV FTDDDQQAIS KVDSVTAKAS TSNLFTLPGG PVGLGLGTEF RHESSTINPQ TLASQGVSAP ANVQTVEGSR NVAAAFYQVD IPILRNLTFT QAGRYDHYSD FGGAFSPSFA LRFQPVQMLT TYASYSRGFR APTLVENSQA VYLSHQNLVD PNDPSGVPTK HFTTEQVAGN PNLQPEHTKN YNIGFQLSPD AMTDIGAAFY KVRIDGVIGT DDPNAVLVAN DPSRVVRNAD GSVRYLVQHF VNLGALDTDG FDLNFRKALR TKYGTFTLAG DWTYVWHFKL HSPGTAPQDF AGNNLALLQP FGASNPRWKG NTSVSWDYRQ LTTTLTWQYT GPYTNAVAAE FGDGGTGSVA SYSQFNLMFN YRGFKHWTIY GGITNLFDKK PPFDVEWQAV PDITGYDQSL YTNLGRFFQV GATYRF
|
| |