Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1661 |
Symbol | |
ID | 4449175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1847264 |
End bp | 1848772 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639693706 |
Product | TPR repeat-containing protein |
Protein accession | YP_835306 |
Protein GI | 116689683 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0601508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCCC ACCGCGACAC TCTTCCGATG GACGATGCGG CCGTCACGCC GGTCAGGGAA CACTACGTAC AGGGCCGATT CGACTCCGCG ATCCAGGCGG CGGAATCGCT CCTCGCGCAG CACGGCGATC ACGGTGAATT GCTGAACCTC GCGGGCGTGT GCCATTTGAA GCTCGGCAAC CTCGTCGCCG CCGAGGCGTG CCTCGAGCGG GCAGCGCACG CGGCGCCCCG GTCGGCCGAT ATCGACAACA ACCTGGGCGT GCTCTATCAG TCGAGCGGGC GGGATGCCGA CGCCGAGCGG GCGTTCGTGC GTGCCGTTTC GAAAGCACCG GGCCACGGCC AGGCGCACCT CAATCTCGGC ATGTTGTTGC GGTCCAGGCA TCGTCTGGAA GAGGCGGAAC GGGCGATCCG GATCGCCGTC GAACAGACGC CCGGCGATCA TGCGGCGCTG AACGCGCTCG GCCTGGTGTT GAAGGACCTG GGCCGCTACG ACGAAGCCGA AGCGGCCTAT CGGCAGGCGC TGGCGCTCGA GCCCGGGCGT GCCGAATACC GGCTCAATCT GGCGAATGTG CTGCTGCACC GGAACGACTG GATCGCGGGG TTGCCGCTCT TCGAAGCGCG TCACGCCCCC GATCTCAACG GCGCATTTTC CGACGCGCCC GCCGTATCGT TCCCGCAGTG GCAGGGCGAG CCGATCGACG GCGCGTCGCT GCTGATCTGG CCGGAACAGG GGCACGGCGA CCAGATCCAG CTGGTCCGCT ATGTCAAAAA ACTCCGGATG CTCGGGGCGA AACGGATCAC GCTGGTGTGC TCGGCCGCGA CGCAGCGGCT GTTCGCGACG CTCCCCGAAG CGGATGCCGT CGTGGCGCGC GACAGGTTCG ATCCGGCCGC CTGCCCGCGT CACGATTTCT GGACTTATGT GTGGAGTATT CCCGTCAATC TGCGGGAATC GCCGGCGTCC ATTCCGGCCA CGCTGCCTTA TCTGCACGCG CCTCGGCATG CGGCGTCGAA ATGGGACCGG CTGATGCCCA AAGGGCGCCT GCGCGTCGGC CTGGTGTGGC AAGGCAATCC CGGTCACGCG AACGACCGCG TGCGCTCGCT GCCCGGCCTG CAGACGCTCG CGCCGCTGTG GGACATCGAC GGCGTCACGT TCGTCAGTCT TCAGAAGGGC GCGAACGAAG CCGATCTGCG TGCCGGAATC GGCGATCGCT TCATCGTCAA TCTGGGCAAC CGGACCACCG ATTTCGCCGA TGTCGCCGCG ATCGTCGCGC GGCTCGATCT CGTCATCGGC GTCGATACCG CCGTGATGCA CCTGAGCGCG GTGCTCGGCA AGCCCGCGTG GATTCTGCTG TCGAACGTGG GCACGGACTG GCGCTGGAGC GGCGCGGGCA CGACTTCCGT GTGGTACCCG GACGTCGTCA CGCTGTTTCG GCAGGCGGCG ACGGAAACGG ACTGGTCCGG CGTGGTCGCG CGCGTTTCGC AGGCGTTGTC CGCGATGCGT GCGACATAG
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Protein sequence | MQPHRDTLPM DDAAVTPVRE HYVQGRFDSA IQAAESLLAQ HGDHGELLNL AGVCHLKLGN LVAAEACLER AAHAAPRSAD IDNNLGVLYQ SSGRDADAER AFVRAVSKAP GHGQAHLNLG MLLRSRHRLE EAERAIRIAV EQTPGDHAAL NALGLVLKDL GRYDEAEAAY RQALALEPGR AEYRLNLANV LLHRNDWIAG LPLFEARHAP DLNGAFSDAP AVSFPQWQGE PIDGASLLIW PEQGHGDQIQ LVRYVKKLRM LGAKRITLVC SAATQRLFAT LPEADAVVAR DRFDPAACPR HDFWTYVWSI PVNLRESPAS IPATLPYLHA PRHAASKWDR LMPKGRLRVG LVWQGNPGHA NDRVRSLPGL QTLAPLWDID GVTFVSLQKG ANEADLRAGI GDRFIVNLGN RTTDFADVAA IVARLDLVIG VDTAVMHLSA VLGKPAWILL SNVGTDWRWS GAGTTSVWYP DVVTLFRQAA TETDWSGVVA RVSQALSAMR AT
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