| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0475 |
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| Symbol | |
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| ID | 4450041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 528742 |
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| End bp | 531303 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639692493 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_834122 |
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| Protein GI | 116688499 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.494661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTGA CCGAACTGGC CCAGGCGATT CGTGGCGGCC TGATCCAGCA GGATCGGCTG
CTGAAGACGG ACATCCCGTC GTTGCCGAAC AATGCGCTCG TGCCGCGTCG CGCCGTAACC
CGCTCGGAGC TCGGCCGTGA TTTCAGCGTA ACGCTCGATC TGGTGTCCAC CGCGAGCGAC
GTCGAGCTCA AGACGCTGGT CGCGCAGCCG ATCACGCTGT GGATTCAGCA GGCGGACAGG
TCGTATCAGC CGATCAACGG CTATATCCAC ACGGCGCGGC GGCTCGGTGC CGACGGCGGC
CTGTCGAGTT ACCAGCTGCG CTTCGCGTCG TGGATGCACT TCCTCAAGTT CCGTAGCGAC
ATGCGGTACT GGCAGGACCA GCCGGTCGAC GCGATCCTCG CCGACGTGTT CGACAGGCAT
CCGCAGGCCA GGGGCCAATA CCGGTTCGCG CTGTCGAAGC CGCTGCCGTC CCGTTCGTAC
TGCCGCCAGA GCGAAACCGA CTGGAACTTC GTGCATCGGC TGATGGAGGA CGAAGGGCTG
TTCGGCTTCT GGCGGCACAG TGAAGACGGG AAGGCGCATA CGTTCGTCAT CACTGACGAT
CTGCATACCG TCGATGCGCT GTCGCCGAAT ACCGTCAGGT TCGATCGCTC GGGCAGCGGC
GCCGAAACCG CCGGTTTCAC GCAATGGACC GCGTCGCGGA CCTTGCAAAG TACGCTGCAT
ACGACGCGCA CGTTCGACTA CAAGTCGCCG TCGTCGGCGG GCAATCCGAA CGGCACGTCG
CTGCCGACGA AAAGCGGGCA GGGCGAGCTG CCCGATCAGG CGGAAATTTA CGAATACACC
GGCGCTTACA CGTATCCGGC GCAGGACCGC GGCGAACACC TGTCGAAGAT TCGCCTCGAG
GAATGGGAGT CGCGTGCGAA GCGTTTCTTC GGCGTGGGCG GCGTGCGTTC GATCGACGCC
GGCCGGCGTT TCACCCTCGT CGACCATCCG GAGCACGATC GCGATGCGGC GAGCGACCGC
GAGTTCGCGG CCATCGGCGT CACGCGTTAC ATCGAGAACA ATCTGCCGGC CTCTGACCAC
GAAGCAAGTT TCCCGCATAG CCTGCAGGAC GCGCTGGCGC AGGTGAAGGC CGGGCACGGG
AAAGGGGGCG CGTTCGAGGT CGGGCACGAC GACGGCTCGG CCGGGTTCTA TCTCGTCGAG
GTCGAGGCGC AGCGCGCGAG CATGCCGTAC CGCAGCCCGT TCGAGCACCG CAAGCCCGCG
ATGCAGCTCG AGACGGCCGT CGTGGTCGGT CCGAAGGGCG AGGAGGTCTA TACCGACGCG
CTGAACCGGA TCAAGGTCAT GTTCGTGTGG GACCGGCAGA GCGAAGGCCG CGAGACGGCA
TCGTGCTGGA TGCGCGTCGT GCAATCGGAT ACCGGCGGCG GTTACGGCGC GGTGCATATT
CCGCGCGTCG GCGAGGAAGT GCTGATCGGC TACATCGGCG GCGACTGCGA TCGGCCGATC
GTCATGCATC GTGTCTACAA CGGGGCGGCC AAGCCGCAAT GGCATAGCGA CGGGCTCCTG
TCGGGCTTCC GGTCGAAGGA GTATGCGGGG TCGGGGCACA ACGAGATGGT GCTCGACGAC
GCGACTGGGC AGAACCGCGC GCGCCTGTTC AGCAGCAGCG GGAATTCGCT GCTTCATCTC
GGCTATCTGA TCGAGCAGAA CGGCAACACC CGTGGTGCGT ATCTCGGCTC GGGTTTCGAT
CTGCGCACGG ATGCGTACGG CGCGCTGCGC GCGGGCCAAG GGCTGTACGT GACGACGCAT
CCGAAGCAGG CGAACAGTCA GCCGCTCGAT GTGACGGAGG CGAAGCAGCA GCTTGGCAGT
GCAGAAGGGT TGATCGAGTC GATGTCGCAG GTGAGCGAGA TGCATCAGGC CGAGAGCCTC
GGTACCGGTC GCGATGCGCT GAAGCAGTTC GCCGATGCGA CGCAGAACAG CGTGGCGGGG
GTGGCCTCGG GGGGCGGCAG GACGGCCGGC GGCGGAACGG GGAATGCCAA TGCGTTCAAG
GAACCCGTGA TGCTGTTCGC GAGCCCGGCG GGGATCGGGA TGGCGTCGCA GCAGTCGGTG
CATCTGGCGA GCGAGCAGCA CACCAATATT GTCAGCGGGC AAAGCACGTT CGTGACCAGT
GGGAAATCGC TGATCGCCGG CATCCGGGAT CGCATCAGCC TGTTCGCGCA GAACGCCGGG
ATGAAGCTGT TTGCCGGGAA GGGCAAGGTC GAGGTCCAGG CGCACGCGGA CAACGTCGAA
CTCACCGCGC AAAAGGCCGT GAAGATGGTA GCGGCGACCG AGGCTGTCGA CGTGGCTGCG
AAGCAGGAGA TATTGCTGAC GTCGGGTGGC GCGTACATCC GGATCAAGGG CGGCAAAATC
GAGCTTCACG CACCCGGGAA AGTCGATTTC AAGGGGGCGC AGCACCAGTT CAGCGGACCG
ACGAGCATGC AGTATCCATT GCCCGCGATG CCGGGCGGCA CGTGCAAGCA ATGCGTGCTG
AACGCGCACA GCGGTCGTGA GTCGATGGTC GAGGCGGATT GA
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| Protein sequence | MNVTELAQAI RGGLIQQDRL LKTDIPSLPN NALVPRRAVT RSELGRDFSV TLDLVSTASD
VELKTLVAQP ITLWIQQADR SYQPINGYIH TARRLGADGG LSSYQLRFAS WMHFLKFRSD
MRYWQDQPVD AILADVFDRH PQARGQYRFA LSKPLPSRSY CRQSETDWNF VHRLMEDEGL
FGFWRHSEDG KAHTFVITDD LHTVDALSPN TVRFDRSGSG AETAGFTQWT ASRTLQSTLH
TTRTFDYKSP SSAGNPNGTS LPTKSGQGEL PDQAEIYEYT GAYTYPAQDR GEHLSKIRLE
EWESRAKRFF GVGGVRSIDA GRRFTLVDHP EHDRDAASDR EFAAIGVTRY IENNLPASDH
EASFPHSLQD ALAQVKAGHG KGGAFEVGHD DGSAGFYLVE VEAQRASMPY RSPFEHRKPA
MQLETAVVVG PKGEEVYTDA LNRIKVMFVW DRQSEGRETA SCWMRVVQSD TGGGYGAVHI
PRVGEEVLIG YIGGDCDRPI VMHRVYNGAA KPQWHSDGLL SGFRSKEYAG SGHNEMVLDD
ATGQNRARLF SSSGNSLLHL GYLIEQNGNT RGAYLGSGFD LRTDAYGALR AGQGLYVTTH
PKQANSQPLD VTEAKQQLGS AEGLIESMSQ VSEMHQAESL GTGRDALKQF ADATQNSVAG
VASGGGRTAG GGTGNANAFK EPVMLFASPA GIGMASQQSV HLASEQHTNI VSGQSTFVTS
GKSLIAGIRD RISLFAQNAG MKLFAGKGKV EVQAHADNVE LTAQKAVKMV AATEAVDVAA
KQEILLTSGG AYIRIKGGKI ELHAPGKVDF KGAQHQFSGP TSMQYPLPAM PGGTCKQCVL
NAHSGRESMV EAD
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