Gene Bcen2424_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0162 
Symbol 
ID4448227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp180076 
End bp181479 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content65% 
IMG OID639692170 
Productmajor facilitator transporter 
Protein accessionYP_833809 
Protein GI116688186 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGACAC CCCTCAATGT CCGGGAGGAG CTGGCGCACG CGCGCATCGG CCGCTTCCAT 
CTACGCTTCG CGGTACTCGT CGCCTTCATC ATGTTCTTCG ACGGCTACGA TCTCTTTAAC
GCCGCCTATG TGATTCCGCT CGTTCGACAC GAATGGCAGC CGTCGCCGAC GATGATCGGG
ATCATGCTGT CAAGCGGCAT CGTCGGGCTG TCGATTGGCT CGGTGCTGCA AGGCCTGATC
GCGGATCGGA TCGGCCGGCG CAAGGTGATG CTCGGCGCGC TGTGGACTCT GACGCTGTCG
AGCGGCCTGC TTGCTACCGT CGTCCACTCG GCGGAGAGCT TCGCGCTCGC GCGTCTCGTC
ATGGGCACCG CGCTCGGTAT GGTCACGCCG CTCGCGCTCA CGTGCATCAA CGAGTGGGCG
CCGCGCCGCA ACGCGAATAC GTTCGCCACC TGGGTCTTTC AGTTTGGCTT TTCGGCGGGC
GGCATCTTCG CGGGCATCGC GGGTCTCACG CTCACGCCGC ATCTGGGCTG GCAGTCGCTT
TACTTCGTCG GCGTGTTGTC GGCGCTCGTC GCGGCGGCGG CGATGAAATG GCTGCCTGAA
TCCGCGCAAT ATCTCGCGCT GCGCGGCCGC ACCGACGACG TGCTCGCGCT GCTGAAAGCG
GTTCGTCCCG AACGCGAAGC GGTTTATCGC GACGCCCACA TTCAACTGAT GCGCGCGACG
TCGCGGCCCG GTTCGATCAG CGATCTGCTG TCCGCCGAAT ATCGCCGTAA CACGCTGGTG
CACTGGATTG CGGGCGCGTT GAGCCTGTTC TGCATCCACG GCCTGACCGG TTGGCTGCCG
ACGATGGTCG TGAACAAGGG CGGTGGCGTG TCGTCGGCGT TCGGCTACGG CACGGTGGTG
ATGATCGCGT CGGTGTTCGG CGGGATCTCG ATGGGGTGGG TGGCTGACCG CATGCACAGC
CGCATCCGCG CGATGGTGGT CGGCTACATC GTCGCGGCGC TCTTCATGGC AGGCCTCGCG
CTCACGCTCG GCAAGACGGG CTCGATGGTG CTGGTCGCGT GCGTTGGCTT CTTCATCTTC
GGCGCGCAGG CGATCATGAA TAACTATCAG GCGATGTGTT ACCGCACGGA AATCCGCGGC
ACCGGCATGG GCGTTGCGGT GGGGTTGAAC CGGATTGGCG GGATACTCGG GCCTGTTATC
GTGGGTGTCG TCGCTTCGCT CAATCCCGAC CCTCTGTGGA CGTTCGCGGT GTTCACGGGC
GCGCTGATCC TCGCCGCGGG CGTGATCGCG CTCGGTAAGA CGGAGATCGC CGCGTTGCCC
GCTTCGTGGC CCAACGCCGC GACGCAGCAG GACGACGAAG CGCTGCCTGC GGGCGCGCGA
CACGATCACG GCGTTGCAGG CTAA
 
Protein sequence
MTTPLNVREE LAHARIGRFH LRFAVLVAFI MFFDGYDLFN AAYVIPLVRH EWQPSPTMIG 
IMLSSGIVGL SIGSVLQGLI ADRIGRRKVM LGALWTLTLS SGLLATVVHS AESFALARLV
MGTALGMVTP LALTCINEWA PRRNANTFAT WVFQFGFSAG GIFAGIAGLT LTPHLGWQSL
YFVGVLSALV AAAAMKWLPE SAQYLALRGR TDDVLALLKA VRPEREAVYR DAHIQLMRAT
SRPGSISDLL SAEYRRNTLV HWIAGALSLF CIHGLTGWLP TMVVNKGGGV SSAFGYGTVV
MIASVFGGIS MGWVADRMHS RIRAMVVGYI VAALFMAGLA LTLGKTGSMV LVACVGFFIF
GAQAIMNNYQ AMCYRTEIRG TGMGVAVGLN RIGGILGPVI VGVVASLNPD PLWTFAVFTG
ALILAAGVIA LGKTEIAALP ASWPNAATQQ DDEALPAGAR HDHGVAG