| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2934 |
|---|
| Symbol | |
|---|
| ID | 4444456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 3303406 |
|---|
| End bp | 3304338 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639690757 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_832413 |
|---|
| Protein GI | 116671480 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.898697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCATCA CCGTAGGAGC CGCGCTCCTC TTCCTCGCAC CACTGCTCCT GGGCGTGGCG
CTGCTGATCC CCGGTGCTCC GGAGATCGCC CTCAGCCGCC GCCGTCCCTA TGACTCTGAC
CCGCCGTCAC GGCTGACGCG CCTGGCAAAC ATCACGGTCG GAACCCTGGA CCGCTTCCTG
GCAGCCAGGA ACCTGCGCCT CTACAACCGG GAGACCTTGG AAACTGCCGG CGTCCGGCTC
AGCCAGGCCG AGTTCATCGT CCTGGTGATG GCCGGTGCCA TCGTGGGCGC CCTGGTGGGC
CTGGTTATCG GCGTGCCCGT GGTCTCCATC CTGCTTGTCA TCCTCGCGCC GTTCGTGGGG
CACCTGGTTT TGGGCTTCCT CGCCGGGAAG AGGCGGGCCA GGTTCGACCA GCAGCTCGGC
GACACCCTCC AGCTCCTCGC CGGAGGGCTG CGGGCAGGCC ACAGCATCCT GCGCGCCATC
GACGCCGCCG CCGCCGAGTC ACAAAGCCCC ACCTCGGAAG AGATGCGCCG GGTCATCACC
GAAACAAGCC TGGGCCGCGA CCTGCTGGCC TCCCTGACGG ACACCTCGGA ACGCATGAAG
AACGAGGACT TCGTCTGGAT CGCGCAGGCT ATCCAGATCA ACCGCGAGGT GGGCGGCAAC
CTGGCTGAGG TCCTGGACCA GGTCAATGAG ACGATCCGCG AGCGGTCCGA AATCAAGGGA
CACATCAAGG CACTTGCGGC CGAGGGGAAG TTCTCCGCCT ACATCCTGAT CGCCATGCCC
ATCGGCATTG TGCTGATGCT CATGGCAGTG AACCCCGGCT ACATGGATGC GATGTTCACC
CATCCGCTGG GTTGGGCCAT GATCGCAGCG TCCGTGGTCT TTATGACCAT CGGCAGCCTG
TGGATGCGCA AAATCATCGA TCTGAAGTTC TGA
|
|---|
| Protein sequence | MLITVGAALL FLAPLLLGVA LLIPGAPEIA LSRRRPYDSD PPSRLTRLAN ITVGTLDRFL
AARNLRLYNR ETLETAGVRL SQAEFIVLVM AGAIVGALVG LVIGVPVVSI LLVILAPFVG
HLVLGFLAGK RRARFDQQLG DTLQLLAGGL RAGHSILRAI DAAAAESQSP TSEEMRRVIT
ETSLGRDLLA SLTDTSERMK NEDFVWIAQA IQINREVGGN LAEVLDQVNE TIRERSEIKG
HIKALAAEGK FSAYILIAMP IGIVLMLMAV NPGYMDAMFT HPLGWAMIAA SVVFMTIGSL
WMRKIIDLKF
|
|---|
| |