| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2671 |
|---|
| Symbol | |
|---|
| ID | 4444759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 2992451 |
|---|
| End bp | 2993392 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639690491 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_832150 |
|---|
| Protein GI | 116671217 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGC CCGCCGCTGT TGCCGTGATC TGCGGACTCC TGCTCGGAGC CGGCCTCTGG
CTCCTGATTG CGAGGTTGCC GTTCATGAGG CCAATGAGCT TTGCCGAACG TATCGAACCG
CAACTGAAGT CGCAAAACCT GGAATCCAAG CTGCTGTTGG CCTCCACAGA CAACCTCACC
CCCTTCGGGC CTCTGGAGCT CATACTGCGC CCAATGCTGA AGGAGGGGCT CTCGGTCCTG
GCGCGATTCA ACCTGGGCTC GTCGGCGCTG AGCCGCAGGC TGGCCCAGGC CGGCGTCCGA
AAGTCTGTCG TCGACTTCAG GGCCGAGCAA CTGCTCTGGG CAGTGCTGGG GTTCGTGCTC
GCCACCGGTC TGATCCTGGT AGGAGCCGCA TCAGGACAGT TCAATCCTTT CTTCGCCGTT
GTCGCCGTTC TGGGCAGTGC CCTCGGAGGG TTCCTTTTCC GGGATTACTG CCTGGGCTCC
CAGATCAAGA GGCGGGAAAA GCTCATGATG GCAGAGTTCC CGAGCCTCGC GGAGTTGATG
GCACTCGCCG TCAGCGCAGG GGAAAGTGCC ACGGGAGCGC TGGACCGCGT CTGCCGCAGC
TCACACGGCG AACTCGCCAG GGAATTTGAG CTGGTGCTTG GCGAAACCCG GGCCGGAAAG
CCGCTCGTCG AAGCGCTGCA GCGATTCTCC GCACGGACCG ACCTGGGACC CTTGGTGCGG
TTCGTCGATG GGATCATCGT GGCAGTTGAA CGGGGGACAC CTCTGGCGGA CGTCCTTCGC
GCCCAGGCGC AGGATGTCCG TGACACCGCC AAACGCGACC TGATGGAATC GGCCGGAAAG
AAAGAAATCG CCATGATGGT GCCGCTGGTG TTTGGTGTCC TGCCGTTGAC CGTCATTTTT
GCAGTGTTTC CCGGACTCGC CGCCATCAGC CTGGGACTAT GA
|
|---|
| Protein sequence | MTSPAAVAVI CGLLLGAGLW LLIARLPFMR PMSFAERIEP QLKSQNLESK LLLASTDNLT
PFGPLELILR PMLKEGLSVL ARFNLGSSAL SRRLAQAGVR KSVVDFRAEQ LLWAVLGFVL
ATGLILVGAA SGQFNPFFAV VAVLGSALGG FLFRDYCLGS QIKRREKLMM AEFPSLAELM
ALAVSAGESA TGALDRVCRS SHGELAREFE LVLGETRAGK PLVEALQRFS ARTDLGPLVR
FVDGIIVAVE RGTPLADVLR AQAQDVRDTA KRDLMESAGK KEIAMMVPLV FGVLPLTVIF
AVFPGLAAIS LGL
|
|---|
| |