| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1407 |
|---|
| Symbol | |
|---|
| ID | 4446078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 1566800 |
|---|
| End bp | 1568611 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639689218 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_830901 |
|---|
| Protein GI | 116669968 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.116406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCTTC GACTTTCCAA GCTGTTCCTG CGCACCCTGC GCGAAGATCC CGCCGATGCC
GAAGTGGCGA GCCACCGGCT CCTGGTCCGC GCCGGGTATA TCCGCAGGGC AGCGCCGGGC
ATCTACACCT GGCTGCCGCT CGGCCTGAGC GTGCTGCGCA AGGTGGAGAA GGTCATTCGC
GAGGAAATGG CCGCCATTGG CGCCCAGGAA GTGCACTTCC CGGCGCTCCT GCCCAAGGAG
CCCTACGAGG CCACTAACCG CTGGACCGAG TACGGCGAGG GCATCTTCCG GCTCAAGGAC
CGCAAGGGCG GGGACTATCT CCTGGCCCCG ACGCACGAGG AAATGTTCAC CCTCCTGGTG
AAGGACCTGT ACTCCTCGTA CAAAGACCTT CCGTTGAGCA TCTACCAGAT CCAGAACAAG
TACCGCGACG AAGCCCGCCC CCGCGCGGGC CTGCTGCGCG GCCGCGAGTT CATCATGAAG
GATTCCTACT CGTTCGACGT CGACGACGCC GGTCTGGACG CGAGTTACAA CGCGCACCGC
GCCGCCTACC TGAAGATCTT CGAACGCCTC GGCCTCGAGG TCATTCCGGT GGCTGCCACG
GCGGGAGCCA TGGGTGGCTC CCGGAGCGAG GAGTTTCTGC ACCCCACCGA GATCGGCGAA
GACACCTTCG TGCGGTCCGC CGGCGGCTAC GCGGCCAACG TTGAAGCCGT CACCACTGTG
GTCCCGGCTG AGATCGACTT CAGCAATGCG CCTGCAGCCG AGATCCGGGA CACCCCGAAC
ACCCCCACCA TCGACACTCT TGTGGACGCG GCAAACCAGC TGGTTCCGCG CGATGAGAAC
GACGGCGGCG CATGGACGGC CGCTGACACG CTCAAGAACG TCGTCCTGGC CGTCACCCTG
CCCACCGGTG AGCGCCAGAT CGTCGTCATT GGCGTACCCG GTGACCGCGG TGTTGACCTG
AAGCGGGTTG AGGCCAACAT CGGCGCTTAC CTGCCGGTCG CCGGCGAGAT CACCGTGGAA
GCCGCGGGCG AGGAAGACCT CGCCCGCAAC CCCCTGATCG TCCGGGGATA CCTCGGCCCG
GGAATGTCCC TCGGCACGCC GCTTCTCGGC CTGGAAGGTG CCGCCAAGCT GCTGTACCTG
GTGGATCCCC GAGTCGTCAA AGGCACCGCA TGGGTGACCG GAGCCAACAT GGCCGGCAAG
CACGTCTTCG GCCTTGTGGC CGGCCGCGAC TTCGGCTGGG ACGGAGTGAT CGAGTGCACG
GAAGTGCGCG CCGGGGATGA AGCCCCGGAC GGTTCCGGCC CGCTGGAAAC CGCACGCGGC
ATTGAGATGG GCCACATCTT CCAGCTTGGC CGCAAGTACG CCGAGGCCCT TGAGTTGAAG
GTCCTGGACC AGAACGGCAA GCAGGTGGTG GTCACCATGG GTTCCTACGG CGTGGGCGTC
ACCCGTGCCG TCGCTGCCTT GGCCGAGTCC AACCACGACG CCAAAGGCCT GGTCTGGCCC
CGTGCAGTGG CTCCTGCCGA TGTCCACGTT GTGGCTGTGG GCCGGGGCGA GGAAATCTTC
GCCGCCGCCG AACAGCTGTC ACTCGAGCTC GAAGCCGCCG GCCTCGAGGT CATCTACGAC
GACCGCCCCA AGGTGTCCCC GGGCGTCAAG TTCGGCGACG CGGAACTCAT TGGCGTGCCC
ACCATCCTGG CCGTTGGCCG CGGGCTGGTG GACGGCGTCG TGGAGATCAA GGACCGCCGC
AGCGGTGAGG CAGAGAACGT GGCAGTTGAG AAGGCTGTTG ACTACGTCGT CAACGCCGTC
CGCAGCAAGT AA
|
|---|
| Protein sequence | MVLRLSKLFL RTLREDPADA EVASHRLLVR AGYIRRAAPG IYTWLPLGLS VLRKVEKVIR
EEMAAIGAQE VHFPALLPKE PYEATNRWTE YGEGIFRLKD RKGGDYLLAP THEEMFTLLV
KDLYSSYKDL PLSIYQIQNK YRDEARPRAG LLRGREFIMK DSYSFDVDDA GLDASYNAHR
AAYLKIFERL GLEVIPVAAT AGAMGGSRSE EFLHPTEIGE DTFVRSAGGY AANVEAVTTV
VPAEIDFSNA PAAEIRDTPN TPTIDTLVDA ANQLVPRDEN DGGAWTAADT LKNVVLAVTL
PTGERQIVVI GVPGDRGVDL KRVEANIGAY LPVAGEITVE AAGEEDLARN PLIVRGYLGP
GMSLGTPLLG LEGAAKLLYL VDPRVVKGTA WVTGANMAGK HVFGLVAGRD FGWDGVIECT
EVRAGDEAPD GSGPLETARG IEMGHIFQLG RKYAEALELK VLDQNGKQVV VTMGSYGVGV
TRAVAALAES NHDAKGLVWP RAVAPADVHV VAVGRGEEIF AAAEQLSLEL EAAGLEVIYD
DRPKVSPGVK FGDAELIGVP TILAVGRGLV DGVVEIKDRR SGEAENVAVE KAVDYVVNAV
RSK
|
|---|
| |