| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1290 |
|---|
| Symbol | |
|---|
| ID | 4446214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 1441389 |
|---|
| End bp | 1443989 |
|---|
| Gene Length | 2601 bp |
|---|
| Protein Length | 866 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639689098 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_830784 |
|---|
| Protein GI | 116669851 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.19935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCG CGCCCGCACT CCGCCAGCGC AGGCAGCCCG CGCAATCACA ACCGTCCGCC
TTCAGCGACG GCCAGCCCGC CTGGCATTTC GCGCTCGACG CCGGGGCCCT GGTTGTCCTG
CTGGGGCTGG GGGTCCTGGG CTTCAGCCTG AGCTTCGGCG GCGACCCCTA CTATTTGATC
GCCGGATTCG GCGGCATCCT GCTGGGCCTT GGCATTGCCG CGGCCAACGC CCACTTCAGG
CTCGGCACGC TCATCACCGC CGCCGCCGTG CTCGGTTCCT ACCTGGTTCT TGGAACACTG
CTCGCCGTGC CGGACGCGGC CATCGCCGGC TTTGTCCCGA CGCTCGAGTC ACTGCGGACC
CTTCTGCTCG GCGTCGTCTT CGCCTGGAAG GACATGCTCA CCGTGGGTGT ACCGGTAGGC
ACCGCCGGCG GGATGCTCAT TGTTCCGTTC CTCAGTGCCC TCCTCACCGC GCTGGCCGCG
GGACTCATGA CCTGGCGGCT GAAGAGCCCG TATTGGCCGC TCCTGCCCGT CCTGGTGCTC
TTCGTGACCG GCATAGCGTT CAGCACCAAC GCCGGCTTCC TCAACGTGGA GCGGGGCATC
TCCCTCACGG TGGTGGCCGT GGCGTGGGCA ACCTTCCGCC GCGACGCACA CCGGCGCAGC
GACACCCGCA AGGTGTCCGT CAACCGCCCT GAGTCGGATG CCGCCACCGC CCGCCGCGCC
AAAGTGCGCC GGCTCGGTTC CGCCGCCGGC GTCATCGCCG CCTGCGTTGC CATCACGGCT
GTGGCTTCGC CCCTTGTCAC CGCCGGCGAT GACCGGACGG TCCTTCGAAA CGTGATCGTT
CCGCCGTTCG ATCCCAAGGA CTACATCACC CCGCTGGCGA GCTTCCGTAA CTTCGTCAAG
GACAAGAAGG ACGACAACCT GTTTGTGGTG AAGGGCCTGC CACGGGACGG GCGCGTCCGG
CTCGCTGCCC TTGACGCCTT CAACGGCACC AACTACAACA TGGACCCGGA CAGCTCCGGC
AACTTCAGCA AGGTGGGGGA TGCCAAGTCC CTGAACACCC TGGCCGGCTC CGACGGTATT
GTGCCCAGCA ACGACTACAC CCTGGACATC ACCATCGAGG ACTACCAGGG ATACTTCCTG
CCGGGCGGCC GCCGCACCAC CGGGATCAGC TTCACCGGCG AATCGTCCGG TGCAGCGTCC
GGACTCTACT TCAACTCCGG AACGGACACC GCAGTCACCA CCAGGGGCCT CGCGAAAGGC
GATGCGTACA GCGTCCAGGT GTCCGACCCC GCCAAGCTCG AACATGGCCA GCTGACGCAG
TACGACTTTG CCAAGGTGGC GCTCCCGGAC GCCGCTGAAG TGCCGCCTGT GGTCGGTTCA
CAGGCCAACG ATTTGTCAGC CGACGCTCCG ACGGCAATCG ACCGCGTCCG GCAGATCGAG
GCGCATTTCC AGAAGAAAGG CGCGTTCAGC AACGGCCTGA TCGACGAAGG CCAGCTGCCC
AGCGTCTCAG GGCACGGCTC GGCACGCATC CGCAGCCTGC TGACCGCCAA GCAGATGCTG
GGCGACGACG AACAGTACGC GGTGGCCATG TCCCTGATGC TCCGGCACCT GGGCATCCCG
TCACGCGTGG TGATGGGCTT CTACCCGGAC CCCAAGAGCC CGGAAAACGG CGCCGGCGAA
GTCAAAATCA CCGGCAAGGA CGTCCACGCC TGGGTTGAGG TCGCTTTCGA CCGCGTCGGC
TGGGTGTCAT TCGACCCCAC GCCGCCCAAG GACAACGTCC CGATTCCGCC GGACCCGGAA
AACAAGTCCA AGCCCAAACC GCAGGTCCTG CAGCCGCCGC CTCCGCCGCA GGAGCCGGCA
GACCTGCCGC CGGACTCATC CCCGGACGCA CTGGACGCTG ACCAGAAGAA GAACAATCCC
TGGCTGTTCT GGGGCCCCAT CCTCGCGGCA CTTGGAATTG CCCTGATCCC CATCGGCATC
CTGGCGCTGC CGCTGCTGCT CATCGCGCTG CTCAAGAGCC GGCGCCGCAA GGCCCGGTTC
TCCGACGGGC ACCCAGCCCA GCGTGTCGGC GGCGGCTGGA ACGAAGTGGT CAGCCTCGCA
ACGGACATGG GCGCCGCCAT CGATACCCGG GCCACCCGCC GGGAGTCCGC CGTCGTCCTG
GGTGAGGCAT TTCCGGGAAC GGCGGGGACC ACCACCCTGC TGGCCCGCCG CGCTGATGCC
TCCATTTTCG GTGCCGGCCA GCCGAGCGAA GCGGAGGTCC AAGAGTACTG GACCATTGTG
GACGGCTCGC TGAAGGAGAT GACAGCTACG GTCGGTTTTT GGAGACGGCA GGCTGCCCGG
TTCTCGCCGC GCTCCCTCCT GGCAGACGGC CGGACCGCAC TCAGCCTCCG CGGTTTCAGG
CTTGTCCGGA CGGCAAAAGA TGATCCCGCG GGTAGGGTGG TGGACGGTCC GCCCCCGGCG
CCCGGCCAGG TTGCCGGCCA GCCGGATGTC CCGGCAGCAA CGCCGGCTCC CGGACAGGCA
CCAACACCCG CACCATCCGG ACCGGAGAAT GAACACACCG TGCTGAGGCG CGATCTGAGA
GAGAACCGCA ACGAACCATG A
|
|---|
| Protein sequence | MSSAPALRQR RQPAQSQPSA FSDGQPAWHF ALDAGALVVL LGLGVLGFSL SFGGDPYYLI
AGFGGILLGL GIAAANAHFR LGTLITAAAV LGSYLVLGTL LAVPDAAIAG FVPTLESLRT
LLLGVVFAWK DMLTVGVPVG TAGGMLIVPF LSALLTALAA GLMTWRLKSP YWPLLPVLVL
FVTGIAFSTN AGFLNVERGI SLTVVAVAWA TFRRDAHRRS DTRKVSVNRP ESDAATARRA
KVRRLGSAAG VIAACVAITA VASPLVTAGD DRTVLRNVIV PPFDPKDYIT PLASFRNFVK
DKKDDNLFVV KGLPRDGRVR LAALDAFNGT NYNMDPDSSG NFSKVGDAKS LNTLAGSDGI
VPSNDYTLDI TIEDYQGYFL PGGRRTTGIS FTGESSGAAS GLYFNSGTDT AVTTRGLAKG
DAYSVQVSDP AKLEHGQLTQ YDFAKVALPD AAEVPPVVGS QANDLSADAP TAIDRVRQIE
AHFQKKGAFS NGLIDEGQLP SVSGHGSARI RSLLTAKQML GDDEQYAVAM SLMLRHLGIP
SRVVMGFYPD PKSPENGAGE VKITGKDVHA WVEVAFDRVG WVSFDPTPPK DNVPIPPDPE
NKSKPKPQVL QPPPPPQEPA DLPPDSSPDA LDADQKKNNP WLFWGPILAA LGIALIPIGI
LALPLLLIAL LKSRRRKARF SDGHPAQRVG GGWNEVVSLA TDMGAAIDTR ATRRESAVVL
GEAFPGTAGT TTLLARRADA SIFGAGQPSE AEVQEYWTIV DGSLKEMTAT VGFWRRQAAR
FSPRSLLADG RTALSLRGFR LVRTAKDDPA GRVVDGPPPA PGQVAGQPDV PAATPAPGQA
PTPAPSGPEN EHTVLRRDLR ENRNEP
|
|---|
| |