Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1925 |
Symbol | |
ID | 4437474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 1788145 |
End bp | 1789686 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639677491 |
Product | ABC-type multidrug transport system, ATPase and permease component |
Protein accession | YP_821233 |
Protein GI | 116628614 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.454784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGGA GTTATGTAAC GAAAAAACAT CTCACCTTCT ATTTTCTAGC CATCGTCATC ACTTGGTTAG AGGCCATTAT CACCCCTGCC CTTATCCAGT ATATCGTCGC TAGTTTTACC AACCGCCAGT TGCATCTCCT CTGGCAGATT TTGCTCTGGG GGATTGGGGG CAATCTGGTG CTTGTCCTGG GCTTGGCTGG GAAGCGCTAT TACTATGCTC GTTTGATGAC TGACTTTAAG GTTGGGATAA AACGCGCTAT TTTTCGGACT TTTTTATACA GCCGTCAGAT TCCTGATGAG GAGGTGCTGT CTGATCTGGA AAATGATGTC CAACAGTTGG AAAATAGCTA TATAGAGCCG ACCGTCATTA TCGTATCCTC GCTAGGTTTT ACAGTCGTTT CCATCGCATA TGCCCTCTGG ACCAATTTCT ATCTGGGGTT ATTGTTTATC ATCTTTTACT CGGTACCAGT TTTGTGTAGC GGACTGGGTT CGAAGCGTTT GGATAGGATT GCGGAGCAAA AATCCCTAGC AAATCAGAAT TATATCGCCC GTGTCAACAA TATGATTGCA GGTGTTGCTC CTATTCGTCA TTATCAGGGC CAGAATTTGT TTTTCAAGAG ATTTTCTAAA GACCTAGAAC AGGCGTTGCA AGAAGAAGTG TCCTACGAAA AGCAACGGTC ACTGAACAGT TTATTTATCA ACAGTATAGA TGCATTTTGC TCTGTGGCGC CCATTGTGAT TGGCGGATTC ATGACCTACC AGAACTACCT TTCTGCGGCT AGTTTTGTCG GCATTTATCT GGTCTCCCAC AACATCGGCT ACCAGTTTCA AGAACTGTCC TACTTTATCA ATACCCGCAA GTCTGCCAAG TCCCTCTGCG ATAAGTATCA AGACTTGTTT GGAAATAAGT TGGCTACTGA CAGCATATTT GACCAATCTG TCTTTCCTAT CCAGTTGGAG CAGGTCAGTG TGGAGAAGGA TGGGGAGACC ATTCTAGCTC CTTGTGATCT GACTATCCAC GCTGGGGAAA AGATTGCTAT CATCGGAGAA AGCGGAGCGG GCAAAACCAC CCTGCTCAAC ATCCTATACG GGGAAATCCA TCCTAGTCAG GGGCAAATTC GTTATCAAGG ACGGGAACTA ACCAGCTGTC AACTCTATCA GGCTGGTGCC TATATCTTGC AATCTAGTCA TGTTTTTGAC GATTTATCTG TGGAGGAAAA CATCGCTCTG GGACAGGAAA TTGACCAGCA AAGAATGGAT AACATCTTGC AAGAAACAGG GCTCCTCAGC CTAAAAGGCA AGGTACCCAG CAACCAAACT TTATCAGGCG GTGAAAAACA GCGCCTTGAA ATCGCCCGTG CTCTCTATCA CAAGCGACAG TTTATCCTAG CAGATGAGGT CAAGGCTAAC CTGGACGCCA AAAATCAAGA AAAAATCAAC CAGCTGCTCT TTTCACTTCC TCAAGCTGTG GTGGAGGTCA TTCACCACTA CACCAAGGAA GACTTGAAGC GCTATGATAA AGTGATTCAT TTGAAAAAGT AG
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Protein sequence | MLRSYVTKKH LTFYFLAIVI TWLEAIITPA LIQYIVASFT NRQLHLLWQI LLWGIGGNLV LVLGLAGKRY YYARLMTDFK VGIKRAIFRT FLYSRQIPDE EVLSDLENDV QQLENSYIEP TVIIVSSLGF TVVSIAYALW TNFYLGLLFI IFYSVPVLCS GLGSKRLDRI AEQKSLANQN YIARVNNMIA GVAPIRHYQG QNLFFKRFSK DLEQALQEEV SYEKQRSLNS LFINSIDAFC SVAPIVIGGF MTYQNYLSAA SFVGIYLVSH NIGYQFQELS YFINTRKSAK SLCDKYQDLF GNKLATDSIF DQSVFPIQLE QVSVEKDGET ILAPCDLTIH AGEKIAIIGE SGAGKTTLLN ILYGEIHPSQ GQIRYQGREL TSCQLYQAGA YILQSSHVFD DLSVEENIAL GQEIDQQRMD NILQETGLLS LKGKVPSNQT LSGGEKQRLE IARALYHKRQ FILADEVKAN LDAKNQEKIN QLLFSLPQAV VEVIHHYTKE DLKRYDKVIH LKK
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