Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1841 |
Symbol | |
ID | 4438061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1710761 |
End bp | 1711651 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639677419 |
Product | ABC transporter |
Protein accession | YP_821162 |
Protein GI | 116628543 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCTGAAAG AAACATCCTT GTCTCTTATG AAAGAGAGTT TAATACGCGG TGATAGGTTG TATCAGATGT TAGCGTTAGT GGGGTTTTCG GACAATATTG TTACTCAGAT TTCTCTTGCT GACAAGCACG GTAATCTTCT AGGGAGTCTA ACAAAGATTG AAACCTATAT GCTTCGTATG ACAAAGGTTC GCAAGAAACT CATGGAGGTG GCGACTTATC CCATACTACT TCTGGGTTTT CTGATTCTGA TTATGCTAGG ACTTAAAAAT TATCTTCTAC CCCAACTCTT AGAGGGTGAT GGTAAGAATA ATTGGGCTGT ACAGTTGGTT CAAATTTTTC CCCAGCTTTT TTTTGTGAGT TTGTGTGGAC TCCTTGTGTT GGGTTTAATT CTCTATCTAT GGGTGAAACG ACAGTCAGCC CTTGTTTTTT ATAGGCGAAT GGCCAAAATC CCTTTTATTG GTCAGACAGT AAGGCTTTAC ACGACCGCCT ATTATGCTAG GGAATGGGGA AATTTATTAG GTCAAGGCGT TGATTTGCTA GATTTGGTGG CTCTTATGCA AGAGCAAAAG TCTAAACTCT TCCGTGAGCT GGGAGCCGAT TTGGAAGAAG CCCTGATGCT GGGACAGAGT TTTCCTGAAC GTATTGCCAG TCATCCGTTT TTTACTAAGG AGCTCTCACT AATTATTGCT TATGGGGAGG CCAATGCGAG GTTGGGCTAT GAGTTGGAAG TTTATGCCGA GGAGGTTTGG CAAAACTTCT TTAACCGTCT TAATAAGGCA ACAACCTTTG TGCAACCCCT CATTTTTGTT ATTGTTGCAG TTGTGATTGT AATGATCTAT GTAGCCATGC TATTACCAAT GTATCAAAAT ATGGAAGGAA TGATGTCATG A
|
Protein sequence | MLKETSLSLM KESLIRGDRL YQMLALVGFS DNIVTQISLA DKHGNLLGSL TKIETYMLRM TKVRKKLMEV ATYPILLLGF LILIMLGLKN YLLPQLLEGD GKNNWAVQLV QIFPQLFFVS LCGLLVLGLI LYLWVKRQSA LVFYRRMAKI PFIGQTVRLY TTAYYAREWG NLLGQGVDLL DLVALMQEQK SKLFRELGAD LEEALMLGQS FPERIASHPF FTKELSLIIA YGEANARLGY ELEVYAEEVW QNFFNRLNKA TTFVQPLIFV IVAVVIVMIY VAMLLPMYQN MEGMMS
|
| |