| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1546 |
|---|
| Symbol | |
|---|
| ID | 4437820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1449021 |
|---|
| End bp | 1451249 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639677144 |
|---|
| Product | cation transport ATPase |
|---|
| Protein accession | YP_820894 |
|---|
| Protein GI | 116628275 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG AAACTTTTGT GGTTAATGGG ATGACTTGTG CGTCCTGTGT GGCCAATGTT
GAAAATGCTG TGAATAATTT GGATGGTGTG GACAAGGCTG TTGTTAATCT GACCACGGAA
AAAATGTCTG TGGATTACTC TGGGAACAAG GTTAGTCCAG AAGCTATTGA AAAAGCTGTG
GCTGACGCTG GTTATGAAGC CCAAGTCTAC AATCCAGATA CAGCTAAAAG TCAGGAAGAA
CGTGAAGAAG ACAAAATCCA CAAGGTGCGT GAGCGCCTCA TTTGGTCATC GGTCTTCACC
ATTCCTCTCT TTTATCTAGC TATGGGGCCA ATGGTCGGTT TGCCTGTGCC AAACTTCTTG
TCTCCTCACC ATGCAGCCTT GACCTATGCC TTGGTGCTTT TGATTTTGAC AGTGCCCGTT
ATGTGGTTGG GTCGTTCCTT CTATAGTAAT GGTTTTCGTA CTTTGGCCAA GGGTCATCCT
AACATGGACG CCTTGGTAGC CTTGGCAACT TCAGCGGCCT TTCTTTATAG TCTCTTTGGT
ACTTATCACA TTTCTTTGGG GCATGTCCAT CACGCCCACC AACTTTATTA TGAGTCGGTA
GCTGTTATCT TGACCCTGAT TACTCTAGGT AAGTATTTTG AAACCCTCTC TAAAGGTCGG
ACTTCAGATG CTATCAAGAA ACTCATGCAC TTGTCAGCCA AGGAGGCAAC CGTTCTTCGG
GACGGTAAGG AAGTCAAGCT TCCTGTGGAT AAGGTTGTTC TTGGTGACCA TATTGTGGTC
AAACCTGGGG AAAAGATAGC CGTGGATGGT CAGGTGATTT CAGGTAGCTC TGCGATTGAT
GAGAGCATGC TAACAGGTGA GTCCCTCCCT ATTGAAAAAT CTGTTGGTAA ACCAGTGTTT
GCAGGTTCTA TTAATGGTCA AGGTAGCTTG ATTTATGAGG CTGAAAAGAT TGGTAAGGAC
ACCTTGCTTT CCCAAATCAT TAAATTGGTT GAAGATGCCC AACAAACCAA GGCACCTATT
GCCAAGATAG CCGATCAGGT GTCAGCAGTC TTTGTTCCTG TTGTCATGGC TATCGCCTTT
GTATCTGGTC TCTTTTGGTA CTTTATCATG GGACAAACCT TTACTTTTGC CATGACTGTA
GCAGTTAGTG TCTTGGTCAT TGCTTGTCCA TGTGCATTGG GACTTGCGAC ACCGACAGCT
ATCATGGTTG GTACAGGGCT TGGCGCTGAG CACGGTATTC TCTACAAGCG TGGGGATGTG
CTCGAGCTAG CTCACAAGGC TGACGTCCTC GTTTTTGACA AGACAGGAAC CATTACTCAA
GGGAAACCTC AGTTGGTTTC TAGCTATACC TATGGCAATA GTGGAGTAGC CTTACAACTT
CTGGCATCAT TGGAAGCCAA GTCTGAACAC CCCTTGAGTC AAGCAATTCT TGTAGCAGCA
GAAAATGCTA ACTTGGACGT GTTAGAGATG GACAATTTCT CAAGTTTGAC TGGACGAGGA
CTTACTGCCA GCTATGCAGG CAAGACTTAT CTAGCTGGGA ACCAAACTCT TATGGCAGAG
GAAAAAGTCG ACTTGACTTC AGCACAAGCT GATTTCCAAA ACTTGACAGC TGATGGTGAA
ACTCCTATAT TCCTAGCTGA AGATGGCAAG TTAATCGGAC TCTTTGGTGT ATCCGATCAG
GTTAAAGCAG ATAGTGCAGA TATGGTGGCG GCTCTTCATC AAATGGGCAA GGAAGTCATC
ATGTTGACTG GTGATAATGA CCAAACAGCC CAAGCCATCG CTCAAAAGGT TGGCATCAAA
CGTGTCATCA GTCAAGTGCT TCCGCAAGAA AAATCTAGAG TGATTAGCGA TCTTCAGGTA
GAAGGAAAAT CAGTCATCAT GGTTGGTGAT GGTATCAATG ATGCCCCAGC CCTTGCGACT
GCTGATATCG GTATTGCCAT GGGGTCAGGG ACAGATATTG CCATGGAAAG TGCGGATATG
GTCCTTATGA AACCCAACCT CATGGATGTG GTCAAAGCTT TGAAAATTAG TCAGGCGACT
ATCACAACGA TTAAAGAAAA CCTCTTTTGG GCCTTTATCT ACAATATCTT GTCTATCCCA
GCGGCTATGG GTGTCCTCCA CCTCTTTGGA GCTCCCCTTC TTGATCCAAT GATAGCAGGA
TTTGCCATGA GTTTTAGCTC TGTTTCGGTC GTTCTTAATT CTCTGCGTCT CAAGCGCTGC
AAAATTTAA
|
|---|
| Protein sequence | MSKETFVVNG MTCASCVANV ENAVNNLDGV DKAVVNLTTE KMSVDYSGNK VSPEAIEKAV
ADAGYEAQVY NPDTAKSQEE REEDKIHKVR ERLIWSSVFT IPLFYLAMGP MVGLPVPNFL
SPHHAALTYA LVLLILTVPV MWLGRSFYSN GFRTLAKGHP NMDALVALAT SAAFLYSLFG
TYHISLGHVH HAHQLYYESV AVILTLITLG KYFETLSKGR TSDAIKKLMH LSAKEATVLR
DGKEVKLPVD KVVLGDHIVV KPGEKIAVDG QVISGSSAID ESMLTGESLP IEKSVGKPVF
AGSINGQGSL IYEAEKIGKD TLLSQIIKLV EDAQQTKAPI AKIADQVSAV FVPVVMAIAF
VSGLFWYFIM GQTFTFAMTV AVSVLVIACP CALGLATPTA IMVGTGLGAE HGILYKRGDV
LELAHKADVL VFDKTGTITQ GKPQLVSSYT YGNSGVALQL LASLEAKSEH PLSQAILVAA
ENANLDVLEM DNFSSLTGRG LTASYAGKTY LAGNQTLMAE EKVDLTSAQA DFQNLTADGE
TPIFLAEDGK LIGLFGVSDQ VKADSADMVA ALHQMGKEVI MLTGDNDQTA QAIAQKVGIK
RVISQVLPQE KSRVISDLQV EGKSVIMVGD GINDAPALAT ADIGIAMGSG TDIAMESADM
VLMKPNLMDV VKALKISQAT ITTIKENLFW AFIYNILSIP AAMGVLHLFG APLLDPMIAG
FAMSFSSVSV VLNSLRLKRC KI
|
|---|
| |