| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1432 |
|---|
| Symbol | |
|---|
| ID | 4437975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1339353 |
|---|
| End bp | 1341098 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639677039 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_820790 |
|---|
| Protein GI | 116628171 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.763455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTT TACTTTTATA TGTTCATTAC AATAAGTTTA ATTTTATTAG TGGGCATGTA
CTCTATCAAT TAGAAAAAAT TCGTCCCTTG TATTCACGGG TGGTCTTTAT CTCCAATAGT
CATCTACCAG AAGATGTGAA GGACCATTTG TCCAATCAAC ACTTGGTGGA TGATATCCTT
GAACGTCAGA ATAGTGGTTT TGACTTCGCT GCGTGGCGGG ATGGAATGAA GACAGTTGGC
TTTGACCAAC TGGCTCACTT TGATTCAGTT ACCCTCATGA ATGATACCTG CTTTGGACCT
CTTTGGGATC TAGAACCAAT CTATGAGCGG TTTGAAAATG AAAATGAAGT GGATTTCTGG
GGAATGACCA ATTACCGGAA AAACAAGGAT TTTAACGAGC ATATTCAGAG TTATTATCTT
AGTTTTAAAA AACAGGTTAT TGAATCATGT TCTTTCCATG AATTTTGGCA GGGTGTTCAA
GACTTTACCA ATGTTCAAGA TGTGATAGAT AACTACGAAA CCAAGATCAC AACAAATTTC
TTGGATGCTG GTTTTCGATA TAAAACTGTC TTTCATACCA TCCATGAAGA TACAACTGGG
ATGCTCCATC CAGACTTTTC CTACTACAAT CCTACAGCGA TTCTCAAACA TAAGGTTCCT
TTTATCAAGG TCAAGTCCAT TGCAAACAAT CAAGGAATCA TGCCCTATAT TTTTGATGAA
TTGGAGCGTG TATCAGACTA TCCATTAGAC CTGATTCTCA ACCACATGTC TATGATTGAT
CGTCCAGACT ATCCTTATCT CTTGTCTCGT AAGTACTTGA AAAACCAAGA ATTGACAGGA
GATTTCGATA AAAAAGTTGC GGTTCATCTC CATGTCTTTT ATGTGGACCT CTTGGAAGAA
TTTTTAGATG CTTTCCAAGA TTTTCATTTC GCCTATGACC TATGGATTAC GACAGATGTA
GAAGAGAAGA AACAGGAAAT TGAGCAAATT CTATCTCGTC GGAGTCAAGA TGCGACGATT
GTAGTGACTG GAAATATTGG ACGAGACGTG TTACCAATGC TGCTCTTAAA AGAGAAACTC
TCGCGCTATG ATTATGTCGG TCATTTCCAT ACCAAGAAAT CCAAAGAAGC AGATTTCTGG
GCGGGTGAAT CCTGGCGGAA AGAATTGATC GATATGCTAG TCAAGCCGGC AGATCAAATC
CTTGCCAATA TGGAGGCCAA TCCAAAAGTC GGAATCACCA TTGGAGATAT TCCAACCTAC
TTCCGTTACA ATCGAATAGT GGTTGCCTGG AATGAAGCTC TCATTTCACC AGAGATGAAC
AAGCTCTGGC AACGGATGGG AGCGACCAAG AACATTGATT TCAAGAATCT TAATACCTTT
GTCATGAGTT ATGGTACTTT TGTTTGGTTT AAATATGATG CATTGAAACC CTTGTTTGAT
TTGAATTTGA CAGTATCAGA TGTTCCAGCT GAACCTCTTC CTCAAAATTC AATTCTTCAT
GCGATTGAAC GCTTATTAGT CTATATTGCT TGGGATCAAA AATATGACTT TAGGATCTCC
CAAAACCCAC ACGTTCTCAC ACCATTTATC GATAATAAGC AGTTGAACAA TCGTGAGGAT
CTCCAACCAC ATACCTTTGT GGATTTTAAT CAAATTGGTG GGATTAAGGG AGCTTTGAAG
TATATTGTGA TAGGTCCAGC AAGAGCTGTG AAATATATTC TCAAAAGGTT ATTGAGTAGA
AAGTAG
|
|---|
| Protein sequence | MERLLLYVHY NKFNFISGHV LYQLEKIRPL YSRVVFISNS HLPEDVKDHL SNQHLVDDIL
ERQNSGFDFA AWRDGMKTVG FDQLAHFDSV TLMNDTCFGP LWDLEPIYER FENENEVDFW
GMTNYRKNKD FNEHIQSYYL SFKKQVIESC SFHEFWQGVQ DFTNVQDVID NYETKITTNF
LDAGFRYKTV FHTIHEDTTG MLHPDFSYYN PTAILKHKVP FIKVKSIANN QGIMPYIFDE
LERVSDYPLD LILNHMSMID RPDYPYLLSR KYLKNQELTG DFDKKVAVHL HVFYVDLLEE
FLDAFQDFHF AYDLWITTDV EEKKQEIEQI LSRRSQDATI VVTGNIGRDV LPMLLLKEKL
SRYDYVGHFH TKKSKEADFW AGESWRKELI DMLVKPADQI LANMEANPKV GITIGDIPTY
FRYNRIVVAW NEALISPEMN KLWQRMGATK NIDFKNLNTF VMSYGTFVWF KYDALKPLFD
LNLTVSDVPA EPLPQNSILH AIERLLVYIA WDQKYDFRIS QNPHVLTPFI DNKQLNNRED
LQPHTFVDFN QIGGIKGALK YIVIGPARAV KYILKRLLSR K
|
|---|
| |