Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1368 |
Symbol | |
ID | 4438130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1275966 |
End bp | 1277012 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639676984 |
Product | aldose 1-epimerase |
Protein accession | YP_820737 |
Protein GI | 116628118 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | [TIGR02636] galactose mutarotase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00941348 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA GCTGCGAAAT TATTGGAAAA GTTGATTCAG GCGATGTCAG TAAAATTTCA ATGGAAAATA ATAATGGTGT TGTCATTTCC ACACTCACAA CAGGTGCTAC ACTTCAGGAG TTTTTGGTTC CAACGGAAAC TGGTGCTCTT AAAAATATAG TACTTGGTTT CAGTGATTTC GAGGATTACT ATAAGAATAA TTTATGTGCC TGCCAGTCCA TTGGTAGGGT TGCTGGAAGA ATTGGGAAAG CTTCGTATAC TCATAATATG GTTCTTTATA GCCTTCCTAA GAATGAGGGA GAAAACTGCT TACATGGCGG TCCAAAAGGA ATGCAGGTCC AAAATTGGAA CTATGTCACA AACCTGAATG ATGAATATGT TGAGACAAAA TTTATTAGAA GACTTTATTC AAGTGTAGAT GGCTTTCCTG GTGATGTGAC AGTCTCTATT AGTTATAGAC TTAACAATAA TAACCGCTTA ACAATACTCT TTGAAGCCTT CGATGTTACA GAGTCAACAA TTTTTAATCC GACAAACCAT GTTTACTTTA ATCTTAGCGA CAAACAGGAT TTATCAAGTC ATGAGTTACA AATCTATTCA GACTATCGTT TAGAGTTGGA TTCTGAGTTA ATTCCAACAG GACAAAAAAT TAATGTAGAT GAAACGAATT ATGATTTTAG AAAGACAACT GACTTGCTAC CTCGAATTGA AGCAAATAAT GGTTTTGATG ATGCCTTTGT AGTTGGAGGG GGAACTTGTG ATCATGTGAA AGAAGTAGCT ATTTTGCATG ACAAAGAAAG TGGAGATGGT ATTGAAATCT TCTCAAACAG AAATGGTTTA GTCATTTTTA CGATGGATGA TATCGAAGAT AATATTTACT TTGCAAGAGA TAAAGGCAAA ATGGCAAAAA GGCGTGAAGC TATTGCTATG GAAGCTCAAA CCCTTCCAGA TGCCGTTAAT CACAAAGGTT TTGGAGATAT TATCTTAGAT AAAGGTCATA GTGTAAACTA TGAAATTGGC TTCCAATACT TTAATTCATC AAGATAA
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Protein sequence | MKISCEIIGK VDSGDVSKIS MENNNGVVIS TLTTGATLQE FLVPTETGAL KNIVLGFSDF EDYYKNNLCA CQSIGRVAGR IGKASYTHNM VLYSLPKNEG ENCLHGGPKG MQVQNWNYVT NLNDEYVETK FIRRLYSSVD GFPGDVTVSI SYRLNNNNRL TILFEAFDVT ESTIFNPTNH VYFNLSDKQD LSSHELQIYS DYRLELDSEL IPTGQKINVD ETNYDFRKTT DLLPRIEANN GFDDAFVVGG GTCDHVKEVA ILHDKESGDG IEIFSNRNGL VIFTMDDIED NIYFARDKGK MAKRREAIAM EAQTLPDAVN HKGFGDIILD KGHSVNYEIG FQYFNSSR
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